/** * Copyright 2020 Huawei Technologies Co., Ltd * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. * You may obtain a copy of the License at * * http://www.apache.org/licenses/LICENSE-2.0 * * Unless required by applicable law or agreed to in writing, software * distributed under the License is distributed on an "AS IS" BASIS, * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. * See the License for the specific language governing permissions and * limitations under the License. */ #include #include #include #include #include "common/common.h" #include "gtest/gtest.h" #include "minddata/dataset/util/status.h" #include "minddata/dataset/engine/gnn/node.h" #include "minddata/dataset/engine/gnn/graph_loader.h" using namespace mindspore::dataset; using namespace mindspore::dataset::gnn; #define print_int_vec(_i, _str) \ do { \ std::stringstream ss; \ std::copy(_i.begin(), _i.end(), std::ostream_iterator(ss, " ")); \ MS_LOG(INFO) << _str << " " << ss.str(); \ } while (false) class MindDataTestGNNGraph : public UT::Common { protected: MindDataTestGNNGraph() = default; }; TEST_F(MindDataTestGNNGraph, TestGraphLoader) { std::string path = "data/mindrecord/testGraphData/testdata"; GraphLoader gl(path, 4); EXPECT_TRUE(gl.InitAndLoad().IsOk()); NodeIdMap n_id_map; EdgeIdMap e_id_map; NodeTypeMap n_type_map; EdgeTypeMap e_type_map; NodeFeatureMap n_feature_map; EdgeFeatureMap e_feature_map; DefaultNodeFeatureMap default_node_feature_map; DefaultEdgeFeatureMap default_edge_feature_map; EXPECT_TRUE(gl.GetNodesAndEdges(&n_id_map, &e_id_map, &n_type_map, &e_type_map, &n_feature_map, &e_feature_map, &default_node_feature_map, &default_edge_feature_map) .IsOk()); EXPECT_EQ(n_id_map.size(), 20); EXPECT_EQ(e_id_map.size(), 40); EXPECT_EQ(n_type_map[2].size(), 10); EXPECT_EQ(n_type_map[1].size(), 10); } TEST_F(MindDataTestGNNGraph, TestGetAllNeighbors) { std::string path = "data/mindrecord/testGraphData/testdata"; Graph graph(path, 1); Status s = graph.Init(); EXPECT_TRUE(s.IsOk()); MetaInfo meta_info; s = graph.GetMetaInfo(&meta_info); EXPECT_TRUE(s.IsOk()); EXPECT_TRUE(meta_info.node_type.size() == 2); std::shared_ptr nodes; s = graph.GetAllNodes(meta_info.node_type[0], &nodes); EXPECT_TRUE(s.IsOk()); std::vector node_list; for (auto itr = nodes->begin(); itr != nodes->end(); ++itr) { node_list.push_back(*itr); if (node_list.size() >= 10) { break; } } std::shared_ptr neighbors; s = graph.GetAllNeighbors(node_list, meta_info.node_type[1], &neighbors); EXPECT_TRUE(s.IsOk()); EXPECT_TRUE(neighbors->shape().ToString() == "<10,6>"); TensorRow features; s = graph.GetNodeFeature(nodes, meta_info.node_feature_type, &features); EXPECT_TRUE(s.IsOk()); EXPECT_TRUE(features.size() == 4); EXPECT_TRUE(features[0]->shape().ToString() == "<10,5>"); EXPECT_TRUE(features[0]->ToString() == "Tensor (shape: <10,5>, Type: int32)\n" "[[0,1,0,0,0],[1,0,0,0,1],[0,0,1,1,0],[0,0,0,0,0],[1,1,0,1,0],[0,0,0,0,1],[0,1,0,0,0],[0,0,0,1,1],[0,1,1," "0,0],[0,1,0,1,0]]"); EXPECT_TRUE(features[1]->shape().ToString() == "<10>"); EXPECT_TRUE(features[1]->ToString() == "Tensor (shape: <10>, Type: float32)\n[0.1,0.2,0.3,0.4,0.5,0.6,0.7,0.8,0.9,1]"); EXPECT_TRUE(features[2]->shape().ToString() == "<10>"); EXPECT_TRUE(features[2]->ToString() == "Tensor (shape: <10>, Type: int32)\n[1,2,3,1,4,3,5,3,5,4]"); } TEST_F(MindDataTestGNNGraph, TestGetSampledNeighbors) { std::string path = "data/mindrecord/testGraphData/testdata"; Graph graph(path, 1); Status s = graph.Init(); EXPECT_TRUE(s.IsOk()); MetaInfo meta_info; s = graph.GetMetaInfo(&meta_info); EXPECT_TRUE(s.IsOk()); EXPECT_TRUE(meta_info.node_type.size() == 2); std::shared_ptr edges; s = graph.GetAllEdges(meta_info.edge_type[0], &edges); EXPECT_TRUE(s.IsOk()); std::vector edge_list; edge_list.resize(edges->Size()); std::transform(edges->begin(), edges->end(), edge_list.begin(), [](const EdgeIdType edge) { return edge; }); TensorRow edge_features; s = graph.GetEdgeFeature(edges, meta_info.edge_feature_type, &edge_features); EXPECT_TRUE(s.IsOk()); EXPECT_TRUE(edge_features[0]->ToString() == "Tensor (shape: <40>, Type: int32)\n" "[0,1,0,0,1,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0,0,1,0,0,1,0,0,0,0,0]"); EXPECT_TRUE(edge_features[1]->ToString() == "Tensor (shape: <40>, Type: float32)\n" "[0.1,0.2,0.3,0.4,0.5,0.6,0.7,0.8,0.9,1,1.1,1.2,1.3,1.4,1.5,1.6,1.7,1.8,1.9,2,2.1,2.2,2.3,2.4,2.5,2.6,2." "7,2.8,2.9,3,3.1,3.2,3.3,3.4,3.5,3.6,3.7,3.8,3.9,4]"); std::shared_ptr nodes; s = graph.GetNodesFromEdges(edge_list, &nodes); EXPECT_TRUE(s.IsOk()); std::unordered_set node_set; std::vector node_list; int index = 0; for (auto itr = nodes->begin(); itr != nodes->end(); ++itr) { index++; if (index % 2 == 0) { continue; } node_set.emplace(*itr); if (node_set.size() >= 5) { break; } } node_list.resize(node_set.size()); std::transform(node_set.begin(), node_set.end(), node_list.begin(), [](const NodeIdType node) { return node; }); std::shared_ptr neighbors; s = graph.GetSampledNeighbors(node_list, {10}, {meta_info.node_type[1]}, &neighbors); EXPECT_TRUE(s.IsOk()); EXPECT_TRUE(neighbors->shape().ToString() == "<5,11>"); neighbors.reset(); s = graph.GetSampledNeighbors(node_list, {2, 3}, {meta_info.node_type[1], meta_info.node_type[0]}, &neighbors); EXPECT_TRUE(s.IsOk()); EXPECT_TRUE(neighbors->shape().ToString() == "<5,9>"); neighbors.reset(); s = graph.GetSampledNeighbors(node_list, {2, 3, 4}, {meta_info.node_type[1], meta_info.node_type[0], meta_info.node_type[1]}, &neighbors); EXPECT_TRUE(s.IsOk()); EXPECT_TRUE(neighbors->shape().ToString() == "<5,33>"); neighbors.reset(); s = graph.GetSampledNeighbors({}, {10}, {meta_info.node_type[1]}, &neighbors); EXPECT_TRUE(s.ToString().find("Input node_list is empty.") != std::string::npos); neighbors.reset(); s = graph.GetSampledNeighbors({-1, 1}, {10}, {meta_info.node_type[1]}, &neighbors); EXPECT_TRUE(s.ToString().find("Invalid node id") != std::string::npos); neighbors.reset(); s = graph.GetSampledNeighbors(node_list, {2, 50}, {meta_info.node_type[0], meta_info.node_type[1]}, &neighbors); EXPECT_TRUE(s.ToString().find("Wrong samples number") != std::string::npos); neighbors.reset(); s = graph.GetSampledNeighbors(node_list, {2}, {5}, &neighbors); EXPECT_TRUE(s.ToString().find("Invalid neighbor type") != std::string::npos); neighbors.reset(); s = graph.GetSampledNeighbors(node_list, {2, 3, 4}, {meta_info.node_type[1], meta_info.node_type[0]}, &neighbors); EXPECT_TRUE(s.ToString().find("The sizes of neighbor_nums and neighbor_types are inconsistent.") != std::string::npos); neighbors.reset(); s = graph.GetSampledNeighbors({301}, {10}, {meta_info.node_type[1]}, &neighbors); EXPECT_TRUE(s.ToString().find("Invalid node id:301") != std::string::npos); } TEST_F(MindDataTestGNNGraph, TestGetNegSampledNeighbors) { std::string path = "data/mindrecord/testGraphData/testdata"; Graph graph(path, 1); Status s = graph.Init(); EXPECT_TRUE(s.IsOk()); MetaInfo meta_info; s = graph.GetMetaInfo(&meta_info); EXPECT_TRUE(s.IsOk()); EXPECT_TRUE(meta_info.node_type.size() == 2); std::shared_ptr nodes; s = graph.GetAllNodes(meta_info.node_type[0], &nodes); EXPECT_TRUE(s.IsOk()); std::vector node_list; for (auto itr = nodes->begin(); itr != nodes->end(); ++itr) { node_list.push_back(*itr); if (node_list.size() >= 10) { break; } } std::shared_ptr neg_neighbors; s = graph.GetNegSampledNeighbors(node_list, 3, meta_info.node_type[1], &neg_neighbors); EXPECT_TRUE(s.IsOk()); EXPECT_TRUE(neg_neighbors->shape().ToString() == "<10,4>"); neg_neighbors.reset(); s = graph.GetNegSampledNeighbors({}, 3, meta_info.node_type[1], &neg_neighbors); EXPECT_TRUE(s.ToString().find("Input node_list is empty.") != std::string::npos); neg_neighbors.reset(); s = graph.GetNegSampledNeighbors({-1, 1}, 3, meta_info.node_type[1], &neg_neighbors); EXPECT_TRUE(s.ToString().find("Invalid node id") != std::string::npos); neg_neighbors.reset(); s = graph.GetNegSampledNeighbors(node_list, 50, meta_info.node_type[1], &neg_neighbors); EXPECT_TRUE(s.ToString().find("Wrong samples number") != std::string::npos); neg_neighbors.reset(); s = graph.GetNegSampledNeighbors(node_list, 3, 3, &neg_neighbors); EXPECT_TRUE(s.ToString().find("Invalid neighbor type") != std::string::npos); } TEST_F(MindDataTestGNNGraph, TestRandomWalk) { std::string path = "data/mindrecord/testGraphData/sns"; Graph graph(path, 1); Status s = graph.Init(); EXPECT_TRUE(s.IsOk()); MetaInfo meta_info; s = graph.GetMetaInfo(&meta_info); EXPECT_TRUE(s.IsOk()); std::shared_ptr nodes; s = graph.GetAllNodes(meta_info.node_type[0], &nodes); EXPECT_TRUE(s.IsOk()); std::vector node_list; for (auto itr = nodes->begin(); itr != nodes->end(); ++itr) { node_list.push_back(*itr); } print_int_vec(node_list, "node list "); std::vector meta_path(59, 1); std::shared_ptr walk_path; s = graph.RandomWalk(node_list, meta_path, 2.0, 0.5, -1, &walk_path); EXPECT_TRUE(s.IsOk()); EXPECT_TRUE(walk_path->shape().ToString() == "<33,60>"); } TEST_F(MindDataTestGNNGraph, TestRandomWalkDefaults) { std::string path = "data/mindrecord/testGraphData/sns"; Graph graph(path, 1); Status s = graph.Init(); EXPECT_TRUE(s.IsOk()); MetaInfo meta_info; s = graph.GetMetaInfo(&meta_info); EXPECT_TRUE(s.IsOk()); std::shared_ptr nodes; s = graph.GetAllNodes(meta_info.node_type[0], &nodes); EXPECT_TRUE(s.IsOk()); std::vector node_list; for (auto itr = nodes->begin(); itr != nodes->end(); ++itr) { node_list.push_back(*itr); } print_int_vec(node_list, "node list "); std::vector meta_path(59, 1); std::shared_ptr walk_path; s = graph.RandomWalk(node_list, meta_path, 1.0, 1.0, -1, &walk_path); EXPECT_TRUE(s.IsOk()); EXPECT_TRUE(walk_path->shape().ToString() == "<33,60>"); }