Merge branch 'develop' into add_nest_sequence_select

fixstartbug
caoying03 8 years ago
commit 94686c5751

@ -24,7 +24,7 @@
description: Format files with ClangFormat.
entry: clang-format -i
language: system
files: \.(c|cc|cxx|cpp|h|hpp|hxx)$
files: \.(c|cc|cxx|cpp|cu|h|hpp|hxx|proto)$
- repo: https://github.com/PaddlePaddle/pre-commit-golang
sha: 8337620115c25ff8333f1b1a493bd031049bd7c0
hooks:

@ -36,8 +36,8 @@ include(simd)
################################ Configurations #######################################
option(WITH_GPU "Compile PaddlePaddle with NVIDIA GPU" ${CUDA_FOUND})
option(WITH_AVX "Compile PaddlePaddle with AVX intrinsics" ${AVX_FOUND})
option(WITH_MKLDNN "Compile PaddlePaddle with mkl-dnn support." OFF)
option(WITH_MKLML "Compile PaddlePaddle with mklml package." OFF)
option(WITH_MKLDNN "Compile PaddlePaddle with mkl-dnn support." ${AVX_FOUND})
option(WITH_MKLML "Compile PaddlePaddle with mklml package." ${AVX_FOUND})
option(WITH_DSO "Compile PaddlePaddle with dynamic linked CUDA" ON)
option(WITH_TESTING "Compile PaddlePaddle with unit testing" ON)
option(WITH_SWIG_PY "Compile PaddlePaddle with inference api" ON)

@ -27,13 +27,16 @@ RUN apt-get update && \
git python-pip python-dev openssh-server bison \
wget unzip unrar tar xz-utils bzip2 gzip coreutils ntp \
curl sed grep graphviz libjpeg-dev zlib1g-dev \
python-numpy python-matplotlib gcc-4.8 g++-4.8 \
python-matplotlib gcc-4.8 g++-4.8 \
automake locales clang-format-3.8 swig doxygen cmake \
liblapack-dev liblapacke-dev libboost-dev \
clang-3.8 llvm-3.8 libclang-3.8-dev \
net-tools && \
apt-get clean -y
# paddle is using numpy.flip, which is introduced since 1.12.0
RUN pip --no-cache-dir install 'numpy>=1.12.0'
# Install Go and glide
RUN wget -O go.tgz https://storage.googleapis.com/golang/go1.8.1.linux-amd64.tar.gz && \
tar -C /usr/local -xzf go.tgz && \

@ -74,8 +74,6 @@ if(WITH_MKLDNN)
set(OPENMP_FLAGS "-fopenmp")
set(CMAKE_C_CREATE_SHARED_LIBRARY_FORBIDDEN_FLAGS ${OPENMP_FLAGS})
set(CMAKE_CXX_CREATE_SHARED_LIBRARY_FORBIDDEN_FLAGS ${OPENMP_FLAGS})
set(CMAKE_SHARED_LINKER_FLAGS "${CMAKE_SHARED_LINKER_FLAGS} -L${MKLDNN_IOMP_DIR} -liomp5 -Wl,--as-needed")
set(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} -L${MKLDNN_IOMP_DIR} -liomp5 -Wl,--as-needed")
set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} ${OPENMP_FLAGS}")
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${OPENMP_FLAGS}")
else()

@ -42,26 +42,21 @@ macro(add_style_check_target TARGET_NAME)
if(WITH_STYLE_CHECK)
set(SOURCES_LIST ${ARGN})
list(REMOVE_DUPLICATES SOURCES_LIST)
list(SORT SOURCES_LIST)
foreach(filename ${SOURCES_LIST})
set(LINT ON)
foreach(pattern ${IGNORE_PATTERN})
if(filename MATCHES ${pattern})
message(STATUS "DROP LINT ${filename}")
set(LINT OFF)
list(REMOVE_ITEM SOURCES_LIST ${filename})
endif()
endforeach()
if(LINT MATCHES ON)
# cpplint code style
get_filename_component(base_filename ${filename} NAME)
set(CUR_GEN ${CMAKE_CURRENT_BINARY_DIR}/${base_filename}.cpplint)
add_custom_command(TARGET ${TARGET_NAME} PRE_BUILD
COMMAND "${PYTHON_EXECUTABLE}" "${PROJ_ROOT}/paddle/scripts/cpplint.py"
"--filter=${STYLE_FILTER}"
"--write-success=${CUR_GEN}" ${filename}
WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR})
endif()
endforeach()
if(SOURCES_LIST)
add_custom_command(TARGET ${TARGET_NAME} POST_BUILD
COMMAND "${PYTHON_EXECUTABLE}" "${PROJ_ROOT}/paddle/scripts/cpplint.py"
"--filter=${STYLE_FILTER}"
${SOURCES_LIST}
COMMENT "cpplint: Checking source code style"
WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR})
endif()
endif()
endmacro()

@ -7,7 +7,7 @@ INCLUDE_DIRECTORIES(${ANY_SOURCE_DIR}/src/extern_lib_any)
ExternalProject_Add(
extern_lib_any
${EXTERNAL_PROJECT_LOG_ARGS}
GIT_REPOSITORY "https://github.com/thelink2012/any.git"
GIT_REPOSITORY "https://github.com/PaddlePaddle/any.git"
GIT_TAG "8fef1e93710a0edf8d7658999e284a1142c4c020"
PREFIX ${ANY_SOURCE_DIR}
UPDATE_COMMAND ""

@ -28,7 +28,14 @@ INCLUDE_DIRECTORIES(${GFLAGS_INCLUDE_DIR})
ExternalProject_Add(
extern_gflags
${EXTERNAL_PROJECT_LOG_ARGS}
GIT_REPOSITORY "https://github.com/gflags/gflags.git"
# TODO(yiwang): The annoying warnings mentioned in
# https://github.com/PaddlePaddle/Paddle/issues/3277 are caused by
# gflags. I fired a PR https://github.com/gflags/gflags/pull/230
# to fix it. Before it gets accepted by the gflags team, we use
# my personal fork, which contains above fix, temporarily. Let's
# change this back to the official Github repo once my PR is
# merged.
GIT_REPOSITORY "https://github.com/wangkuiyi/gflags.git"
PREFIX ${GFLAGS_SOURCES_DIR}
UPDATE_COMMAND ""
CMAKE_ARGS -DCMAKE_CXX_COMPILER=${CMAKE_CXX_COMPILER}

@ -69,8 +69,13 @@ ENDIF(NOT ${CBLAS_FOUND})
MESSAGE(STATUS "BLAS library: ${CBLAS_LIBRARIES}")
INCLUDE_DIRECTORIES(${CBLAS_INC_DIR})
ADD_LIBRARY(cblas STATIC IMPORTED)
SET_PROPERTY(TARGET cblas PROPERTY IMPORTED_LOCATION ${CBLAS_LIBRARIES})
# FIXME(gangliao): generate cblas target to track all high performance
# linear algebra libraries for cc_library(xxx SRCS xxx.c DEPS cblas)
SET(dummyfile ${CMAKE_CURRENT_BINARY_DIR}/cblas_dummy.c)
FILE(WRITE ${dummyfile} "const char * dummy = \"${dummyfile}\";")
ADD_LIBRARY(cblas STATIC ${dummyfile})
TARGET_LINK_LIBRARIES(cblas ${CBLAS_LIBRARIES})
IF(NOT ${CBLAS_FOUND})
ADD_DEPENDENCIES(cblas extern_openblas)
LIST(APPEND external_project_dependencies cblas)

@ -24,7 +24,6 @@ IF(WITH_PYTHON)
ENDIF(WITH_PYTHON)
SET(py_env "")
SET(USE_VIRTUALENV_FOR_TEST 1)
IF(PYTHONINTERP_FOUND)
find_python_module(pip REQUIRED)
find_python_module(numpy REQUIRED)

@ -115,7 +115,7 @@ set(COMMON_FLAGS
-Wno-error=literal-suffix
-Wno-error=sign-compare
-Wno-error=unused-local-typedefs
-Wno-error=parentheses-equality # Warnings in Pybind11
-Wno-error=parentheses-equality # Warnings in pybind11
)
set(GPU_COMMON_FLAGS
@ -195,6 +195,7 @@ endif()
# Modern gpu architectures: Pascal
if (CUDA_VERSION VERSION_GREATER "8.0" OR CUDA_VERSION VERSION_EQUAL "8.0")
list(APPEND __arch_flags " -gencode arch=compute_60,code=sm_60")
list(APPEND CUDA_NVCC_FLAGS --expt-relaxed-constexpr)
endif()
# Custom gpu architecture

@ -403,3 +403,16 @@ function(py_proto_compile TARGET_NAME)
protobuf_generate_python(py_srcs ${py_proto_compile_SRCS})
add_custom_target(${TARGET_NAME} ALL DEPENDS ${py_srcs})
endfunction()
function(py_test TARGET_NAME)
if(WITH_TESTING)
set(options STATIC static SHARED shared)
set(oneValueArgs "")
set(multiValueArgs SRCS DEPS)
cmake_parse_arguments(py_test "${options}" "${oneValueArgs}" "${multiValueArgs}" ${ARGN})
add_test(NAME ${TARGET_NAME}
COMMAND env PYTHONPATH=${PADDLE_PYTHON_PACKAGE_DIR}
python2 ${py_test_SRCS}
WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR})
endif()
endfunction()

@ -118,7 +118,6 @@ endfunction()
macro(add_unittest_without_exec TARGET_NAME)
add_executable(${TARGET_NAME} ${ARGN})
link_paddle_test(${TARGET_NAME})
add_style_check_target(${TARGET_NAME} ${ARGN})
endmacro()
# add_unittest
@ -150,9 +149,12 @@ endfunction()
# Create a python unittest using run_python_tests.sh,
# which takes care of making correct running environment
function(add_python_test TEST_NAME)
add_test(NAME ${TEST_NAME}
COMMAND env PADDLE_PACKAGE_DIR=${PADDLE_PYTHON_PACKAGE_DIR}
bash ${PROJ_ROOT}/paddle/scripts/run_python_tests.sh
${USE_VIRTUALENV_FOR_TEST} ${PYTHON_EXECUTABLE} ${ARGN}
WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR})
foreach(arg ${ARGN})
get_filename_component(py_fn ${arg} NAME_WE)
set(TRG_NAME ${TEST_NAME}_${py_fn})
add_test(NAME ${TRG_NAME}
COMMAND env PYTHONPATH=${PADDLE_PYTHON_PACKAGE_DIR}
python2 ${arg}
WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR})
endforeach()
endfunction()

@ -0,0 +1,110 @@
# Intel® MKL-DNN on PaddlePaddle: Design Doc
我们计划将Intel深度神经网络数学库(**MKL-DNN**\[[1](#references)\])集成到PaddlePaddle充分展现英特尔平台的优势有效提升PaddlePaddle在英特尔架构上的性能。
我们短期内的基本目标是:
- 完成常用layer的MKL-DNN实现。
- 完成常见深度神经网络VGGGoogLeNet 和 ResNet的MKL-DNN实现。
## Contents
- [Overview](#overview)
- [Actions](#actions)
- [CMake](#cmake)
- [Layers](#layers)
- [Activations](#activations)
- [Unit Tests](#unit-tests)
- [Protobuf Messages](#protobuf-messages)
- [Python API](#python-api)
- [Demos](#demos)
- [Benchmarking](#benchmarking)
- [Others](#others)
- [Design Concerns](#design-concerns)
## Overview
我们会把MKL-DNN作为第三方库集成进PaddlePaddle整体框架图
<div align="center">
<img src="image/overview.png" width=350><br/>
Figure 1. PaddlePaddle on IA.
</div>
## Actions
我们把集成方案大致分为了如下几个方面。
### CMake
我们会在`CMakeLists.txt`中会添加`WITH_MKLDNN`的选项,当设置这个值为`ON`的时候会启用编译MKL-DNN功能。同时会自动开启OpenMP用于提高MKL-DNN的性能。
同时,我们会引入`WITH_MKLML`选项用于选择是否使用MKL-DNN自带的MKLML安装包。这个安装包可以独立于MKL-DNN使用但是建议在开启MKL-DNN的同时也打开MKLML的开关这样才能发挥最好的性能。
所以,我们会在`cmake/external`目录新建`mkldnn.cmake`和`mklml.cmake`文件它们会在编译PaddlePaddle的时候下载对应的软件包并放到PaddlePaddle的third party目录中。
**备注**:当`WITH_MKLML=ON`的时候会优先使用这个包作为PaddlePaddle的CBLAS和LAPACK库所以会稍微改动`cmake/cblas.cmake`中的逻辑。
### Layers
所有MKL-DNN相关的C++ layers都会按照PaddlePaddle的目录结构存放在
`paddle/gserver/layers`中,并且文件名都会一以*Mkldnn*开头。
所有MKL-DNN的layers都会继承于一个叫做`MkldnnLayer`的父类该父类继承于PaddlePaddle的基类`Layer`。
### Activations
由于在PaddlePaddle中激活函数是独立于layer概念的所以会在`paddle/gserver/activations`目录下添加一个`MkldnnActivation.h`文件定义一些用于MKL-DNN的接口实现方法还是会在`ActivationFunction.cpp`文件。
### Unit Tests
会在`paddle/gserver/test`目录下添加`test_Mkldnn.cpp`和`MkldnnTester.*`用于MKL-DNN的测试。
Activation的测试计划在PaddlePaddle原有的测试文件上直接添加新的测试type。
### Protobuf Messages
根据具体layer的需求可能会在`proto/ModelConfig.proto`里面添加必要的选项。
### Python API
目前只考虑**v1 API**。
计划在`python/paddle/trainer/config_parser.py`里面添加`use_mkldnn`这个选择方便用户选择使用MKL-DNN的layers。
具体实现方式比如:
```python
use_mkldnn = bool(int(g_command_config_args.get("use_mkldnn", 0)))
if use_mkldnn
self.layer_type = mkldnn_*
```
所有MKL-DNN的layer type会以*mkldnn_*开头,以示区分。
并且可能在`python/paddle/trainer_config_helper`目录下的`activations.py `和`layers.py`里面添加必要的MKL-DNN的接口。
### Demos
会在`v1_api_demo`目录下添加一个`mkldnn`的文件夹里面放入一些用于MKL-DNN测试的demo脚本。
### Benchmarking
会考虑添加部分逻辑在`benchmark/paddle/image/run.sh`添加使用MKL-DNN的测试。
### Others
1. 如果在使用MKL-DNN的情况下会把CPU的Buffer对齐为64。
2. 深入PaddlePaddle寻找有没有其他可以优化的可能进一步优化。比如可能会用OpenMP改进SGD的更新性能。
## Design Concerns
为了更好的符合PaddlePaddle的代码风格\[[2](#references)\]同时又尽可能少的牺牲MKL-DNN的性能\[[3](#references)\]。
我们总结出一些特别需要注意的点:
1. 使用**deviceId_**。为了尽可能少的在父类Layer中添加变量或者函数我们决定使用已有的`deviceId_`变量来区分layer的属性定义`-2`为`MkldnnLayer`特有的设备ID。
2. 重写父类Layer的**init**函数,修改`deviceId_`为`-2`代表这个layer是用于跑在MKL-DNN的环境下。
3. 创建`MkldnnMatrix`用于管理MKL-DNN会用到的相关memory函数、接口以及会用的到格式信息。
4. 创建`MkldnnBase`定义一些除了layer和memory相关的类和函数。包括MKL-DNN会用到`MkldnnStream`和`CpuEngine`,和未来可能还会用到`FPGAEngine`等。
5. 在**Argument**里添加两个`MkldnnMatrixPtr`,取名为`mkldnnValue`和`mkldnnGrad`,用于存放`MkldnnLayer`会用到的memory buffer。 并且添加函数cvt(会修改为一个更加合适的函数名),用于处理"CPU device"和"MKL-DNN device"之间memory的相互转化。
6. 在父类`Layer`中的`getOutput`函数中添加一段逻辑,用于判断`deviceId`并针对device在MKL-DNN和CPU之间不统一的情况做一个前期转换。 也就是调用`Argument`的cvt函数把output统一到需要的device上。
7. 在原来的`FLAGS`中添加一个`use_mkldnn`的flag用于选择是否使用MKL-DNN的相关功能。
## References
1. [Intel Math Kernel Library for Deep Neural Networks (Intel MKL-DNN)](https://github.com/01org/mkl-dnn "Intel MKL-DNN")
2. [原来的方案](https://github.com/PaddlePaddle/Paddle/pull/3096)会引入**nextLayer**的信息。但是在PaddlePaddle中无论是重构前的layer还是重构后的op都不会想要知道next layer/op的信息。
3. MKL-DNN的高性能格式与PaddlePaddle原有的`NCHW`不同(PaddlePaddle中的CUDNN部分使用的也是`NCHW`,所以不存在这个问题)所以需要引入一个转换方法并且只需要在必要的时候转换这种格式才能更好的发挥MKL-DNN的性能。

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@ -21,22 +21,15 @@
#
# It same as PYTHONPATH=${YOUR_PYTHON_PATH}:$PYTHONPATH {exec...}
#
if ! python -c "import paddle" >/dev/null 2>/dev/null; then
PYPATH=""
set -x
while getopts "d:" opt; do
case $opt in
d)
PYPATH=$OPTARG
;;
esac
done
shift $(($OPTIND - 1))
export PYTHONPATH=$PYPATH:$PYTHONPATH
$@
else
echo "paddle package is already in your PYTHONPATH. But unittest need a clean environment."
echo "Please uninstall paddle package before start unittest. Try to 'pip uninstall paddle'"
exit 1
fi
PYPATH=""
set -x
while getopts "d:" opt; do
case $opt in
d)
PYPATH=$OPTARG
;;
esac
done
shift $(($OPTIND - 1))
export PYTHONPATH=$PYPATH:$PYTHONPATH
$@

@ -1,2 +1,6 @@
add_python_test(test_swig_api
testArguments.py testGradientMachine.py testMatrix.py testVector.py testTrain.py testTrainer.py)
py_test(testTrain SRCS testTrain.py)
py_test(testMatrix SRCS testMatrix.py)
py_test(testVector SRCS testVector.py)
py_test(testTrainer SRCS testTrainer.py)
py_test(testArguments SRCS testArguments.py)
py_test(testGradientMachine SRCS testGradientMachine.py)

@ -12,17 +12,15 @@ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
See the License for the specific language governing permissions and
limitations under the License. */
#include "hl_batch_transpose.h"
#include "hl_base.h"
#include "hl_batch_transpose.h"
const int TILE_DIM = 64;
const int BLOCK_ROWS = 16;
// No bank-conflict transpose for a batch of data.
__global__ void batchTransposeNoBankConflicts(real* odata,
const real* idata,
int numSamples, int width,
int height) {
__global__ void batchTransposeNoBankConflicts(
real* odata, const real* idata, int numSamples, int width, int height) {
__shared__ float tile[TILE_DIM][TILE_DIM + 1];
const int x = blockIdx.x * TILE_DIM + threadIdx.x;
@ -50,12 +48,12 @@ __global__ void batchTransposeNoBankConflicts(real* odata,
newX] = tile[threadIdx.x][j];
}
void batchTranspose(const real* input, real* output, int width, int height,
int batchSize) {
void batchTranspose(
const real* input, real* output, int width, int height, int batchSize) {
dim3 dimBlock(TILE_DIM, BLOCK_ROWS, 1);
dim3 dimGrid(DIVUP(width, TILE_DIM), DIVUP(height, TILE_DIM), batchSize);
batchTransposeNoBankConflicts<<<dimGrid, dimBlock, 0, STREAM_DEFAULT>>>
(output, input, batchSize, width, height);
batchTransposeNoBankConflicts<<<dimGrid, dimBlock, 0, STREAM_DEFAULT>>>(
output, input, batchSize, width, height);
CHECK_SYNC("batchTranspose failed!");
}

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@ -12,13 +12,12 @@ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
See the License for the specific language governing permissions and
limitations under the License. */
#include <cmath>
#include <stdlib.h>
#include "hl_cuda.h"
#include "hl_time.h"
#include <cmath>
#include "hl_base.h"
#include "hl_cuda.h"
#include "hl_perturbation_util.cuh"
#include "hl_time.h"
#define _USE_MATH_DEFINES
@ -30,10 +29,16 @@ limitations under the License. */
* centerX, centerY: translation.
* sourceX, sourceY: output coordinates in the original image.
*/
__device__ void getTranformCoord(int x, int y, real theta, real scale,
real tgtCenter, real imgCenter,
real centerR, real centerC,
int* sourceX, int* sourceY) {
__device__ void getTranformCoord(int x,
int y,
real theta,
real scale,
real tgtCenter,
real imgCenter,
real centerR,
real centerC,
int* sourceX,
int* sourceY) {
real H[4] = {cosf(-theta), -sinf(-theta), sinf(-theta), cosf(-theta)};
// compute coornidates in the rotated and scaled image
@ -57,11 +62,17 @@ __device__ void getTranformCoord(int x, int y, real theta, real scale,
* created by Wei Xu (genome), converted by Jiang Wang
*/
__global__ void kSamplingPatches(const real* imgs, real* targets,
int imgSize, int tgtSize, const int channels,
int samplingRate, const real* thetas,
const real* scales, const int* centerRs,
const int* centerCs, const real padValue,
__global__ void kSamplingPatches(const real* imgs,
real* targets,
int imgSize,
int tgtSize,
const int channels,
int samplingRate,
const real* thetas,
const real* scales,
const int* centerRs,
const int* centerCs,
const real padValue,
const int numImages) {
const int caseIdx = blockIdx.x * 4 + threadIdx.x;
const int pxIdx = blockIdx.y * 128 + threadIdx.y;
@ -80,8 +91,15 @@ __global__ void kSamplingPatches(const real* imgs, real* targets,
const int pxY = pxIdx / tgtSize;
int srcPxX, srcPxY;
getTranformCoord(pxX, pxY, thetas[imgIdx], scales[imgIdx], tgtCenter,
imgCenter, centerCs[caseIdx], centerRs[caseIdx], &srcPxX,
getTranformCoord(pxX,
pxY,
thetas[imgIdx],
scales[imgIdx],
tgtCenter,
imgCenter,
centerCs[caseIdx],
centerRs[caseIdx],
&srcPxX,
&srcPxY);
imgs += (imgIdx * imgPixels + srcPxY * imgSize + srcPxX) * channels;
@ -100,10 +118,15 @@ __global__ void kSamplingPatches(const real* imgs, real* targets,
*
* created by Wei Xu
*/
void hl_generate_disturb_params(real*& gpuAngle, real*& gpuScaleRatio,
int*& gpuCenterR, int*& gpuCenterC,
int numImages, int imgSize, real rotateAngle,
real scaleRatio, int samplingRate,
void hl_generate_disturb_params(real*& gpuAngle,
real*& gpuScaleRatio,
int*& gpuCenterR,
int*& gpuCenterC,
int numImages,
int imgSize,
real rotateAngle,
real scaleRatio,
int samplingRate,
bool isTrain) {
// The number of output samples.
int numPatches = numImages * samplingRate;
@ -123,7 +146,8 @@ void hl_generate_disturb_params(real*& gpuAngle, real*& gpuScaleRatio,
for (int i = 0; i < numImages; i++) {
r_angle[i] =
(rotateAngle * M_PI / 180.0) * (rand() / (RAND_MAX + 1.0) // NOLINT
- 0.5);
-
0.5);
s_ratio[i] =
1 + (rand() / (RAND_MAX + 1.0) - 0.5) * scaleRatio; // NOLINT
}
@ -140,8 +164,10 @@ void hl_generate_disturb_params(real*& gpuAngle, real*& gpuScaleRatio,
int pxY =
(int)(real(imgSize - 1) * rand() / (RAND_MAX + 1.0)); // NOLINT
const real H[4] = {cos(-r_angle[i]), -sin(-r_angle[i]),
sin(-r_angle[i]), cos(-r_angle[i])};
const real H[4] = {cos(-r_angle[i]),
-sin(-r_angle[i]),
sin(-r_angle[i]),
cos(-r_angle[i])};
real x = pxX - imgCenter;
real y = pxY - imgCenter;
real xx = H[0] * x + H[1] * y;
@ -185,9 +211,12 @@ void hl_generate_disturb_params(real*& gpuAngle, real*& gpuScaleRatio,
delete[] center_c;
}
void hl_conv_random_disturb_with_params(const real* images, int imgSize,
int tgtSize, int channels,
int numImages, int samplingRate,
void hl_conv_random_disturb_with_params(const real* images,
int imgSize,
int tgtSize,
int channels,
int numImages,
int samplingRate,
const real* gpuRotationAngle,
const real* gpuScaleRatio,
const int* gpuCenterR,
@ -202,29 +231,59 @@ void hl_conv_random_disturb_with_params(const real* images, int imgSize,
dim3 threadsPerBlock(4, 128);
dim3 numBlocks(DIVUP(numPatches, 4), DIVUP(targetSize, 128));
kSamplingPatches <<<numBlocks, threadsPerBlock>>>
(images, target, imgSize, tgtSize, channels, samplingRate,
gpuRotationAngle, gpuScaleRatio, gpuCenterR, gpuCenterC,
paddingValue, numImages);
kSamplingPatches<<<numBlocks, threadsPerBlock>>>(images,
target,
imgSize,
tgtSize,
channels,
samplingRate,
gpuRotationAngle,
gpuScaleRatio,
gpuCenterR,
gpuCenterC,
paddingValue,
numImages);
hl_device_synchronize();
}
void hl_conv_random_disturb(const real* images, int imgSize,
int tgtSize, int channels, int numImages,
real scaleRatio, real rotateAngle,
int samplingRate, real* gpu_r_angle,
real* gpu_s_ratio, int* gpu_center_r,
int* gpu_center_c, int paddingValue,
bool isTrain, real* targets) {
void hl_conv_random_disturb(const real* images,
int imgSize,
int tgtSize,
int channels,
int numImages,
real scaleRatio,
real rotateAngle,
int samplingRate,
real* gpu_r_angle,
real* gpu_s_ratio,
int* gpu_center_r,
int* gpu_center_c,
int paddingValue,
bool isTrain,
real* targets) {
// generate the random disturbance sequence and the sampling locations
hl_generate_disturb_params(gpu_r_angle, gpu_s_ratio, gpu_center_r,
gpu_center_c, numImages, imgSize, rotateAngle,
scaleRatio, samplingRate, isTrain);
hl_conv_random_disturb_with_params(
images, imgSize, tgtSize, channels, numImages,
samplingRate, gpu_r_angle, gpu_s_ratio,
gpu_center_r, gpu_center_r, paddingValue,
targets);
hl_generate_disturb_params(gpu_r_angle,
gpu_s_ratio,
gpu_center_r,
gpu_center_c,
numImages,
imgSize,
rotateAngle,
scaleRatio,
samplingRate,
isTrain);
hl_conv_random_disturb_with_params(images,
imgSize,
tgtSize,
channels,
numImages,
samplingRate,
gpu_r_angle,
gpu_s_ratio,
gpu_center_r,
gpu_center_r,
paddingValue,
targets);
}

@ -12,15 +12,16 @@ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
See the License for the specific language governing permissions and
limitations under the License. */
#include "hl_base.h"
#include "hl_device_functions.cuh"
#include "hl_cuda.h"
#include "hl_device_functions.cuh"
#include "paddle/utils/Logging.h"
template<int blockDimX, int blockDimY, int gridDimX, bool AddRow>
__global__ void KeMatrixAddRows(real* output, int ldo,
real* table, int ldt,
template <int blockDimX, int blockDimY, int gridDimX, bool AddRow>
__global__ void KeMatrixAddRows(real* output,
int ldo,
real* table,
int ldt,
int* ids,
int numSamples,
int tableSize,
@ -31,8 +32,8 @@ __global__ void KeMatrixAddRows(real* output, int ldo,
while (idy < numSamples) {
int tableId = ids[idy];
if ((0 <= tableId) && (tableId < tableSize)) {
real *out = output + idy * ldo;
real *tab = table + tableId * ldt;
real* out = output + idy * ldo;
real* tab = table + tableId * ldt;
for (int i = idx; i < dim; i += blockDimX) {
if (AddRow) {
paddle::paddleAtomicAdd(&tab[i], out[i]);
@ -45,8 +46,10 @@ __global__ void KeMatrixAddRows(real* output, int ldo,
}
}
void hl_matrix_select_rows(real* output, int ldo,
real* table, int ldt,
void hl_matrix_select_rows(real* output,
int ldo,
real* table,
int ldt,
int* ids,
int numSamples,
int tableSize,
@ -57,14 +60,16 @@ void hl_matrix_select_rows(real* output, int ldo,
dim3 threads(128, 8);
dim3 grid(8, 1);
KeMatrixAddRows<128, 8, 8, 0><<< grid, threads, 0, STREAM_DEFAULT >>>
(output, ldo, table, ldt, ids, numSamples, tableSize, dim);
KeMatrixAddRows<128, 8, 8, 0><<<grid, threads, 0, STREAM_DEFAULT>>>(
output, ldo, table, ldt, ids, numSamples, tableSize, dim);
CHECK_SYNC("hl_matrix_select_rows failed");
}
void hl_matrix_add_to_rows(real* table, int ldt,
real* input, int ldi,
void hl_matrix_add_to_rows(real* table,
int ldt,
real* input,
int ldi,
int* ids,
int numSamples,
int tableSize,
@ -75,16 +80,15 @@ void hl_matrix_add_to_rows(real* table, int ldt,
dim3 threads(128, 8);
dim3 grid(8, 1);
KeMatrixAddRows<128, 8, 8, 1><<< grid, threads, 0, STREAM_DEFAULT >>>
(input, ldi, table, ldt, ids, numSamples, tableSize, dim);
KeMatrixAddRows<128, 8, 8, 1><<<grid, threads, 0, STREAM_DEFAULT>>>(
input, ldi, table, ldt, ids, numSamples, tableSize, dim);
CHECK_SYNC("hl_matrix_add_to_rows failed");
}
template<class T, int blockDimX, int gridDimX>
__global__ void KeVectorSelect(T* dst, int sized,
const T* src, int sizes,
const int* ids, int sizei) {
template <class T, int blockDimX, int gridDimX>
__global__ void KeVectorSelect(
T* dst, int sized, const T* src, int sizes, const int* ids, int sizei) {
int idx = threadIdx.x + blockDimX * blockIdx.x;
while (idx < sizei) {
int index = ids[idx];
@ -95,9 +99,8 @@ __global__ void KeVectorSelect(T* dst, int sized,
}
template <class T>
void hl_vector_select_from(T* dst, int sized,
const T* src, int sizes,
const int* ids, int sizei) {
void hl_vector_select_from(
T* dst, int sized, const T* src, int sizes, const int* ids, int sizei) {
CHECK_NOTNULL(dst);
CHECK_NOTNULL(src);
CHECK_NOTNULL(ids);
@ -105,18 +108,17 @@ void hl_vector_select_from(T* dst, int sized,
dim3 threads(512, 1);
dim3 grid(8, 1);
KeVectorSelect<T, 512, 8><<< grid, threads, 0, STREAM_DEFAULT >>>
(dst, sized, src, sizes, ids, sizei);
KeVectorSelect<T, 512, 8><<<grid, threads, 0, STREAM_DEFAULT>>>(
dst, sized, src, sizes, ids, sizei);
CHECK_SYNC("hl_vector_select_from failed");
}
template
void hl_vector_select_from(real* dst, int sized,
const real* src, int sizes,
const int* ids, int sizei);
template
void hl_vector_select_from(int* dst, int sized,
const int* src, int sizes,
const int* ids, int sizei);
template void hl_vector_select_from(real* dst,
int sized,
const real* src,
int sizes,
const int* ids,
int sizei);
template void hl_vector_select_from(
int* dst, int sized, const int* src, int sizes, const int* ids, int sizei);

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