Merge branch 'develop' into maxseq

fix-typo
Luo Tao 7 years ago
commit f086f5649b

@ -12,24 +12,22 @@ The topology is saved as a plain text in a detailed self-contain protobuf file.
The parameters are saved as a binary file. As we all know, the protobuf message has a limit of [64M size](https://developers.google.com/protocol-buffers/docs/reference/cpp/google.protobuf.io.coded_stream#CodedInputStream.SetTotalBytesLimit.details). We have done a [benchmark experiment](https://github.com/PaddlePaddle/Paddle/pull/4610), which shows that protobuf is not fit for the task.
As a result, we design a particular format for tensor serialization. By default, an arbitrary tensor in Paddle is a [LoDTensor](https://github.com/PaddlePaddle/Paddle/blob/develop/paddle/framework/lod_tensor.md), and has a description information proto of [LoDTensorDesc](https://github.com/PaddlePaddle/Paddle/blob/develop/paddle/framework/framework.proto#L99). We save the DescProto as the byte string header. It contains all the necessary information, such as the `dims`, the `name` of the tensor, and the `LoD` information in [LoDTensor](https://github.com/PaddlePaddle/Paddle/blob/1c0a4c901c9fc881d120249c703b15d1c50dae7d/paddle/framework/lod_tensor.md). A tensor stores values in a continuous memory buffer. For speed we dump the raw memory to disk and save it as the byte string content. So, the binary format of one tensor is,
|HeaderLength|ContentLength|**LoDTensorDesc**|**TensorValue**|
As a result, we design a particular format for tensor serialization. By default, an arbitrary tensor in Paddle is a [LoDTensor](https://github.com/PaddlePaddle/Paddle/blob/develop/paddle/framework/lod_tensor.md), and has a description information proto of [LoDTensorDesc](https://github.com/PaddlePaddle/Paddle/blob/develop/paddle/framework/framework.proto#L99). We save the DescProto as the byte string header. It contains all the necessary information, such as the `dims`, and the `LoD` information in [LoDTensor](https://github.com/PaddlePaddle/Paddle/blob/1c0a4c901c9fc881d120249c703b15d1c50dae7d/paddle/framework/lod_tensor.md). A tensor stores values in a continuous memory buffer. For speed we dump the raw memory to disk and save it as the byte string content. So, the binary format of one tensor is,
The table below shows a tensor's byte view in detail. Note that all the signed values are written in the little-endian format.
```text
[offset] [type] [description]
0004 4 bytes integer HeaderLength, the length of LoDTensorDesc
0008 4 bytes integer ContentLength, the length of LodTensor Buffer
0009 1 bytes char TensorDesc
00010 1 bytes char TensorDesc
...
00100 1 bytes char TensorValue
00101 1 bytes char TensorValue
00102 1 bytes char TensorValue ..
...
```
|field name | type | description |
| --- | --- | --- |
| version | uint32_t | Version of saved file. Always 0 now. |
| tensor desc length | uint32_t | TensorDesc(Protobuf message) length in bytes. |
| tensor desc | void* | TensorDesc protobuf binary message |
| tensor data | void* | Tensor's data in binary format. The length of `tensor_data` is decided by `TensorDesc.dims()` and `TensorDesc.data_type()` |
| lod_level | uint64_t | Level of LoD |
| length of lod[0] | uint64_t | [Optional] length of lod[0] in bytes. |
| data of lod[0] | uint64_t* | [Optional] lod[0].data() |
| ... | ... | ... |
## Summary

@ -67,7 +67,7 @@ func main() {
cp, err = pserver.LoadCheckpoint(e, idx)
if err != nil {
if err == pserver.ErrCheckpointNotFound {
log.Info("Could not find the pserver checkpoint.")
log.Info("load checkpoint error", "error", err)
} else {
panic(err)
}
@ -99,7 +99,7 @@ func main() {
candy.Must(err)
go func() {
log.Info("starting pserver", log.Ctx{"port": *port})
log.Info("serving pserver", log.Ctx{"port": *port})
err = http.Serve(l, nil)
candy.Must(err)
}()

@ -71,9 +71,15 @@ func newOptimizer(paramWithConfigs ParameterWithConfig, State []byte) *optimizer
cstate = unsafe.Pointer(&s[0])
}
var cptr (*C.uchar)
if len(c) > 0 {
cptr = (*C.uchar)(&c[0])
} else {
log.Error("empty config", "param name", paramWithConfigs.Param.Name)
}
o.config = c
o.opt = C.paddle_create_optimizer(
(*C.uchar)(&c[0]),
cptr,
C.int(len(c)),
C.paddle_element_type(p.ElementType),
cbuffer,

@ -17,12 +17,11 @@ package pserver
import (
"bufio"
"bytes"
"crypto/md5"
"encoding/gob"
"encoding/hex"
"encoding/json"
"errors"
"fmt"
"hash/crc32"
"io/ioutil"
"os"
"path"
@ -40,7 +39,7 @@ type ElementType int
// ErrCheckpointNotFound indicates that the pserver checkpoint could
// not be found.
var ErrCheckpointNotFound = errors.New("checkpoint not found")
var ErrCheckpointNotFound = errors.New("checkpoint not found in etcd")
// RPC error message.
const (
@ -76,7 +75,7 @@ type ParameterWithConfig struct {
type checkpointMeta struct {
UUID string `json:"uuid"`
Path string `json:"path"`
MD5 string `json:"md5"`
CRC32 uint32 `json:"crc32"`
Timestamp int64 `json:"timestamp"`
}
@ -92,7 +91,7 @@ type Service struct {
idx int
checkpointInterval time.Duration
checkpointPath string
client *EtcdClient
client KVStore
mu sync.Mutex
optMap map[string]*optimizer
@ -104,7 +103,12 @@ type parameterCheckpoint struct {
State []byte
}
func loadMeta(e *EtcdClient, idx int) (meta checkpointMeta, err error) {
type KVStore interface {
GetKey(key string, timeout time.Duration) ([]byte, error)
PutKey(key string, value []byte, timeout time.Duration, withLease bool) error
}
func loadMeta(e KVStore, idx int) (meta checkpointMeta, err error) {
v, err := e.GetKey(PsCheckpoint+strconv.Itoa(idx), 3*time.Second)
if err != nil {
return
@ -123,7 +127,7 @@ func loadMeta(e *EtcdClient, idx int) (meta checkpointMeta, err error) {
}
// LoadCheckpoint loads checkpoint from file.
func LoadCheckpoint(e *EtcdClient, idx int) (Checkpoint, error) {
func LoadCheckpoint(e KVStore, idx int) (Checkpoint, error) {
log.Info("Loading checkpoint", "pserver index", idx)
defer traceTime(time.Now(), "load checkpoint")
@ -137,11 +141,8 @@ func LoadCheckpoint(e *EtcdClient, idx int) (Checkpoint, error) {
return nil, err
}
// TODO(helin): change MD5 to CRC since CRC is better for file
// checksum in our use case (emphasize speed over security).
h := md5.New()
md5 := hex.EncodeToString(h.Sum(content))
if md5 != cpMeta.MD5 {
crc32 := crc32.ChecksumIEEE(content)
if crc32 != cpMeta.CRC32 {
return nil, errors.New(WrongChecksum)
}
@ -150,12 +151,13 @@ func LoadCheckpoint(e *EtcdClient, idx int) (Checkpoint, error) {
if err = dec.Decode(&cp); err != nil {
return nil, err
}
return cp, nil
}
// NewService creates a new service, will bypass etcd registration if no
// endpoints specified. It will recovery from checkpoint file if a exists a specified checkpoint.
func NewService(idx int, interval time.Duration, path string, client *EtcdClient, cp Checkpoint) (*Service, error) {
func NewService(idx int, interval time.Duration, path string, client KVStore, cp Checkpoint) (*Service, error) {
s := &Service{
idx: idx,
checkpointInterval: interval,
@ -173,6 +175,7 @@ func NewService(idx int, interval time.Duration, path string, client *EtcdClient
}
s.optMap[p.Param.Name] = newOptimizer(p, item.State)
}
close(s.initialized)
}
return s, nil
}
@ -221,7 +224,7 @@ func (s *Service) FinishInitParams(_ int, _ *int) error {
for range t {
err := s.checkpoint()
if err != nil {
log.Error("finish init params error", log.Ctx{"error": err})
log.Error("checkpoint error", log.Ctx{"error": err})
}
}
}()
@ -274,6 +277,7 @@ func (s *Service) GetParam(name string, parameter *Parameter) error {
parameter.Name = name
parameter.ElementType = opt.elementType
parameter.Content = opt.GetWeights()
log.Info("sending parameter to the trainer", "name", parameter.Name, "size", len(parameter.Content), "type", parameter.ElementType)
return nil
}
@ -354,20 +358,29 @@ func (s *Service) checkpoint() (err error) {
oldMeta, err := loadMeta(s.client, s.idx)
if err == ErrCheckpointNotFound {
log.Info("Do not have existing checkpoint.")
log.Info("old meta not found, skip removing old meta")
err = nil
} else if err == nil {
log.Info("removing old meta")
if oldMeta.Path != "" {
rmErr := os.Remove(oldMeta.Path)
if rmErr != nil {
// log error, but still treat checkpoint as
// successful.
log.Error("remove old meta file error", log.Ctx{"error": rmErr})
}
}
}
if err != nil {
return
}
h := md5.New()
md5 := hex.EncodeToString(h.Sum(buf.Bytes()))
crc32 := crc32.ChecksumIEEE(buf.Bytes())
cpMeta := checkpointMeta{
UUID: id,
Timestamp: time.Now().UnixNano(),
MD5: md5,
CRC32: crc32,
Path: p,
}
@ -381,14 +394,5 @@ func (s *Service) checkpoint() (err error) {
return
}
if oldMeta.Path != "" {
rmErr := os.Remove(oldMeta.Path)
if rmErr != nil {
// log error, but still treat checkpoint as
// successful.
log.Error("remove old meta file error", log.Ctx{"error": rmErr})
}
}
return
}

@ -0,0 +1,86 @@
package pserver
import (
"bytes"
"encoding/binary"
"fmt"
"testing"
"time"
"github.com/stretchr/testify/assert"
)
const testDir = "./test_data"
type myKV struct {
m map[string][]byte
}
func (m *myKV) GetKey(key string, timeout time.Duration) ([]byte, error) {
if m.m == nil {
m.m = make(map[string][]byte)
}
return m.m[key], nil
}
func (m *myKV) PutKey(key string, value []byte, timeout time.Duration, withLease bool) error {
if m.m == nil {
m.m = make(map[string][]byte)
}
m.m[key] = value
return nil
}
func TestCheckpoint(t *testing.T) {
kv := &myKV{}
s, err := NewService(0, time.Hour, testDir, kv, nil)
assert.Nil(t, err)
err = s.checkpoint()
assert.Nil(t, err)
_, err = LoadCheckpoint(kv, 0)
assert.Nil(t, err)
}
func float32ToByte(f float32) []byte {
var buf bytes.Buffer
err := binary.Write(&buf, binary.LittleEndian, f)
if err != nil {
fmt.Println("binary.Write failed:", err)
}
return buf.Bytes()
}
func TestCheckpointWithData(t *testing.T) {
kv := &myKV{}
s, err := NewService(0, time.Hour, testDir, kv, nil)
assert.Nil(t, err)
var content []byte
for i := 0; i < 50000; i++ {
content = append(content, float32ToByte(float32(i))...)
}
p1 := Parameter{Name: "p1", ElementType: 1, Content: content}
err = s.InitParam(ParameterWithConfig{Param: p1}, nil)
assert.Nil(t, err)
err = s.FinishInitParams(0, nil)
assert.Nil(t, err)
var p2 Parameter
err = s.GetParam(p1.Name, &p2)
assert.Nil(t, err)
assert.Equal(t, p1, p2)
err = s.checkpoint()
assert.Nil(t, err)
cp, err := LoadCheckpoint(kv, 0)
assert.Nil(t, err)
s1, err := NewService(0, time.Hour, testDir, kv, cp)
assert.Nil(t, err)
var p3 Parameter
err = s1.GetParam(p1.Name, &p3)
assert.Nil(t, err)
assert.Equal(t, p1, p3)
}

@ -178,7 +178,3 @@ func TestBlockUntilInitialized(t *testing.T) {
wg.Wait()
}
func TestCheckpointSpeed(t *testing.T) {
//TODO(zhihong): test speed
}

@ -64,12 +64,18 @@ paddle_error paddle_gradient_machine_create_for_inference_with_parameters(
modelConfigProtobuf.resize(modelConfigSize);
is.read(&modelConfigProtobuf[0], modelConfigSize);
paddle::TrainerConfig config;
paddle::ModelConfig modelConfig;
if (!config.ParseFromString(modelConfigProtobuf) || !config.IsInitialized()) {
return kPD_PROTOBUF_ERROR;
if (!modelConfig.ParseFromString(modelConfigProtobuf) ||
!modelConfig.IsInitialized()) {
return kPD_PROTOBUF_ERROR;
}
} else {
modelConfig = config.model_config();
}
auto ptr = new paddle::capi::CGradientMachine();
ptr->machine.reset(paddle::GradientMachine::create(
config.model_config(), CREATE_MODE_TESTING, {paddle::PARAMETER_VALUE}));
modelConfig, CREATE_MODE_TESTING, {paddle::PARAMETER_VALUE}));
std::vector<paddle::ParameterPtr>& parameters = ptr->machine->getParameters();
for (auto& para : parameters) {
para->load(is);

@ -1,6 +1,5 @@
# ddim lib
proto_library(framework_proto SRCS framework.proto)
proto_library(saver_proto SRCS framework.proto saver.proto)
cc_library(ddim SRCS ddim.cc DEPS eigen3)
cc_test(ddim_test SRCS ddim_test.cc DEPS ddim)
@ -10,7 +9,7 @@ cc_library(tensor SRCS tensor.cc DEPS ddim place paddle_memory device_context)
cc_test(tensor_test SRCS tensor_test.cc DEPS tensor)
cc_test(eigen_test SRCS eigen_test.cc DEPS tensor)
cc_library(lod_tensor SRCS lod_tensor.cc DEPS ddim place tensor saver_proto framework_proto)
cc_library(lod_tensor SRCS lod_tensor.cc DEPS ddim place tensor framework_proto)
cc_test(lod_tensor_test SRCS lod_tensor_test.cc DEPS lod_tensor paddle_memory)
nv_test(lod_tensor_gpu_test SRCS lod_tensor_test.cu DEPS lod_tensor)
@ -27,7 +26,7 @@ cc_test(op_proto_maker_test SRCS op_proto_maker_test.cc DEPS op_proto_maker)
cc_library(op_info SRCS op_info.cc DEPS attribute framework_proto)
cc_library(operator SRCS operator.cc DEPS op_info device_context tensor scope glog)
cc_test(operator_test SRCS operator_test.cc DEPS operator op_registry)
cc_library(proto_desc SRCS var_desc.cc op_desc.cc block_desc.cc program_desc.cc DEPS attribute ddim op_info operator)
cc_library(proto_desc SRCS var_desc.cc op_desc.cc block_desc.cc program_desc.cc DEPS attribute ddim op_info operator glog)
cc_library(op_registry SRCS op_registry.cc DEPS op_proto_maker op_info operator glog proto_desc)
cc_test(op_registry_test SRCS op_registry_test.cc DEPS op_registry)
@ -43,7 +42,7 @@ add_custom_command(TARGET framework_py_proto POST_BUILD
WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR})
cc_library(backward SRCS backward.cc DEPS net_op)
cc_test(backward_test SRCS backward_test.cc DEPS backward recurrent_op device_context)
cc_test(backward_test SRCS backward_test.cc DEPS backward recurrent_op device_context fill_constant_op)
cc_library(executor SRCS executor.cc DEPS op_registry device_context scope framework_proto backward glog)

@ -315,6 +315,7 @@ static void CreateGradVarInBlock(
return false; /* not break */
});
if (need_infer_shape) {
ops[op_index]->InferVarType(block_desc);
ops[op_index]->InferShape(*block_desc);
}
}
@ -452,11 +453,16 @@ ParamGradInfoMap AppendBackward(
std::transform(target_shape_desc.begin(), target_shape_desc.end(),
std::back_inserter(target_shape),
[](int64_t dim) { return static_cast<int>(dim); });
VLOG(3) << "backward from loss=" << target.Name()
<< " data_type=" << target.GetDataType();
std::unique_ptr<OpDescBind> fill_one_op(
new OpDescBind("fill_constant", {}, {{"Out", {fill_one_op_out}}},
{{"shape", target_shape},
{"value", static_cast<float>(1.0)},
{"data_type", framework::DataType::FP32}}));
{"data_type", target.GetDataType()}}));
// infer var type of fill_one_op
fill_one_op->InferVarType(root_block);
root_block->AppendAllocatedOp(std::move(fill_one_op));
size_t forward_op_num = root_block->OpSize();
size_t forward_block_num = program_desc.Size();
@ -475,8 +481,7 @@ ParamGradInfoMap AppendBackward(
std::unordered_map<std::string, GradVarInfo> retv;
auto var = root_block->Var(fill_one_op_out);
// FIXME(qiao) infer the data type
var->SetDataType(framework::DataType::FP32);
var->SetDataType(target.GetDataType());
var->SetShape(target.Shape());
auto& target_grad = retv[target.Name()];
target_grad.name_ = fill_one_op_out;

@ -21,6 +21,8 @@
#include "paddle/framework/var_desc.h"
#include "paddle/operators/net_op.h"
USE_OP(fill_constant);
namespace paddle {
namespace framework {

@ -120,6 +120,17 @@ BlockDesc *BlockDescBind::Proto() {
Flush();
return desc_;
}
BlockDescBind::BlockDescBind(ProgramDescBind *prog, BlockDesc *desc)
: prog_(prog), desc_(desc), need_update_(false) {
for (const VarDesc &var_desc : desc_->vars()) {
vars_[var_desc.name()].reset(new VarDescBind(var_desc));
}
for (const OpDesc &op_desc : desc_->ops()) {
ops_.emplace_back(new OpDescBind(op_desc, prog));
}
}
BlockDescBind::BlockDescBind(const BlockDescBind &other, BlockDesc *desc,
ProgramDescBind *prog)
: prog_(prog), desc_(desc) {

@ -36,8 +36,7 @@ class ProgramDescBind;
class BlockDescBind {
public:
BlockDescBind(ProgramDescBind *prog, BlockDesc *desc)
: prog_(prog), desc_(desc), need_update_(false) {}
BlockDescBind(ProgramDescBind *prog, BlockDesc *desc);
BlockDescBind(const BlockDescBind &other, BlockDesc *desc,
ProgramDescBind *prog);

@ -15,6 +15,7 @@
#pragma once
#include <typeindex>
#include "paddle/framework/framework.pb.h"
#include "paddle/platform/enforce.h"
namespace paddle {
namespace framework {

@ -28,7 +28,8 @@ enum OpInfoFillType {
kOperator = 0,
kOpProtoAndCheckerMaker = 1,
kGradOpDescMaker = 2,
kVarTypeInference = 3
kVarTypeInference = 3,
kShapeInference = 4
};
template <typename T>
@ -42,7 +43,10 @@ struct OpInfoFillTypeID {
? kGradOpDescMaker
: (std::is_base_of<VarTypeInference, T>::value
? kVarTypeInference
: static_cast<OpInfoFillType>(-1))));
: (std::is_base_of<InferShapeBase, T>::value
? kShapeInference
: static_cast<OpInfoFillType>(
-1)))));
}
};
@ -121,6 +125,16 @@ struct OpInfoFiller<T, kVarTypeInference> {
}
};
template <typename T>
struct OpInfoFiller<T, kShapeInference> {
void operator()(const char* op_type, OpInfo* info) const {
info->infer_shape_ = [](InferShapeContext* ctx) {
T inference;
inference(ctx);
};
}
};
} // namespace details
} // namespace framework

@ -20,6 +20,7 @@ limitations under the License. */
#include <set>
#include <vector>
#include "paddle/framework/feed_fetch_type.h"
#include "paddle/framework/lod_tensor.h"
#include "paddle/framework/op_registry.h"
#include "paddle/framework/scope.h"
@ -56,6 +57,22 @@ Executor::~Executor() {
}
}
static void CreateTensor(Variable* var, VarDesc::VarType var_type) {
if (var_type == VarDesc::LOD_TENSOR) {
var->GetMutable<LoDTensor>();
} else if (var_type == VarDesc::SELECTED_ROWS) {
var->GetMutable<SelectedRows>();
} else if (var_type == VarDesc::FEED_MINIBATCH) {
var->GetMutable<FeedFetchList>();
} else if (var_type == VarDesc::FETCH_LIST) {
var->GetMutable<FeedFetchList>();
} else {
PADDLE_THROW(
"Variable type must be "
"LoDTensor/SelectedRows/FEED_MINIBATCH/FETCH_LIST.");
}
}
void Executor::Run(const ProgramDesc& pdesc, Scope* scope, int block_id) {
// TODO(tonyyang-svail):
// - only runs on the first device (i.e. no interdevice communication)
@ -69,10 +86,12 @@ void Executor::Run(const ProgramDesc& pdesc, Scope* scope, int block_id) {
for (auto& var : block.vars()) {
if (var.persistable()) {
auto* ptr = scope->Var(var.name());
CreateTensor(ptr, var.type());
VLOG(3) << "Create Variable " << var.name()
<< " global, which pointer is " << ptr;
} else {
auto* ptr = local_scope.Var(var.name());
CreateTensor(ptr, var.type());
VLOG(3) << "Create Variable " << var.name()
<< " locally, which pointer is " << ptr;
}

@ -13,7 +13,6 @@
limitations under the License. */
#include "paddle/framework/lod_tensor.h"
#include "paddle/framework/saver.pb.h"
#include "paddle/memory/memcpy.h"
#include "paddle/memory/memory.h"
@ -136,141 +135,5 @@ void LoDTensor::ShrinkInLevel(size_t level, size_t elem_begin,
PADDLE_ENFORCE_LT(begin, end, "Cannot shrink, the result tensor is empty.");
ShareDataWith(Slice(begin, end));
}
std::string LoDTensor::SerializeToString() const {
LoDTensorProto desc;
// set data_type
if (this->type() == typeid(int8_t)) desc.set_data_type(DataType::BOOL);
if (this->type() == typeid(int16_t)) desc.set_data_type(DataType::INT16);
if (this->type() == typeid(int32_t)) desc.set_data_type(DataType::INT32);
if (this->type() == typeid(int64_t)) desc.set_data_type(DataType::INT64);
// FIXME(dzh): there is no fp16 in standard c++
if (this->type() == typeid(float)) // NOLINT
desc.set_data_type(DataType::FP32);
if (this->type() == typeid(double)) // NOLINT
desc.set_data_type(DataType::FP64);
for (int i = 0; i < dims().size(); ++i) {
desc.add_dims(dims()[i]);
}
// set lod information
desc.set_lod_level(this->NumLevels());
for (size_t i = 0; i < this->NumLevels(); ++i) {
LoDInfo* lod = desc.add_levels();
for (size_t j = 0; j < lod_[i].size(); ++j) {
lod->add_level(lod_[i][j]);
}
}
desc.set_version(0);
std::string desc_bytes = desc.SerializeAsString();
// FIXME(dzh) : implement fix chunk size buffer.
size_t DESC_SIZE = desc_bytes.size();
size_t DATA_SIZE = holder_->size() - offset_;
const size_t BUFFER_SIZE = DESC_SIZE + DATA_SIZE + 2 * sizeof(size_t);
char* buffer =
static_cast<char*>(memory::Alloc(platform::CPUPlace(), BUFFER_SIZE));
// format: desc_size data_size, desc_bytes, data_bytes.
platform::CPUPlace src_place;
platform::CPUPlace dst_place;
memory::Copy(dst_place, buffer, src_place, &BUFFER_SIZE, sizeof(size_t));
memory::Copy(dst_place, buffer + sizeof(size_t), src_place, &DESC_SIZE,
sizeof(size_t));
memory::Copy(dst_place, buffer + sizeof(size_t) * 2, src_place,
desc_bytes.c_str(), desc_bytes.size());
PADDLE_ENFORCE(this->numel() != 0, "Serialize a empty Tensor!");
platform::Place place = holder_->place();
int element_width = holder_->size() / this->numel();
if (platform::is_cpu_place(place)) {
memory::Copy(dst_place, buffer + sizeof(size_t) * 2 + desc_bytes.size(),
boost::get<platform::CPUPlace>(place),
static_cast<char*>(holder_->ptr()) + offset_ / element_width,
DATA_SIZE);
}
#ifdef PADDLE_WITH_GPU
if (platform::is_gpu_place(place)) {
memory::Copy(dst_place, buffer + sizeof(size_t) * 2 + desc_bytes.size(),
boost::get<platform::GPUPlace>(place),
static_cast<char*>(holder_->ptr()) + offset_ / element_width,
DATA_SIZE);
}
#endif
std::string ret(buffer, BUFFER_SIZE);
memory::Free(platform::CPUPlace(), buffer);
return ret;
}
void LoDTensor::DeserializeFromString(const std::string& s,
const platform::Place& dst_place) {
size_t DESC_SIZE, BUFFER_SIZE;
platform::CPUPlace src_place;
memory::Copy(src_place, &BUFFER_SIZE, src_place, s.c_str(), sizeof(size_t));
memory::Copy(src_place, &DESC_SIZE, src_place, s.c_str() + sizeof(size_t),
sizeof(size_t));
const size_t DATA_SIZE = BUFFER_SIZE - DESC_SIZE - sizeof(size_t) * 2;
// parse LoDTensorDesc
LoDTensorProto desc;
desc.ParseFromArray(s.c_str() + sizeof(size_t) * 2, DESC_SIZE);
std::vector<int64_t> dims;
std::copy(desc.dims().begin(), desc.dims().end(), std::back_inserter(dims));
this->Resize(make_ddim(dims));
// parse data type
void* ptr = nullptr;
if (desc.data_type() == DataType::BOOL)
ptr = this->mutable_data<bool>(dst_place);
if (desc.data_type() == DataType::INT16)
ptr = this->mutable_data<int16_t>(dst_place);
if (desc.data_type() == DataType::INT32)
ptr = this->mutable_data<int32_t>(dst_place);
if (desc.data_type() == DataType::INT64)
ptr = this->mutable_data<int64_t>(dst_place);
// FIXME(dzh): there is no fp16 in standard c++
if (desc.data_type() == DataType::FP32)
ptr = this->mutable_data<float>(dst_place);
if (desc.data_type() == DataType::FP64)
ptr = this->mutable_data<double>(dst_place);
LoD lod;
std::vector<size_t> levels;
for (int i = 0; i < desc.levels().size(); ++i) {
auto current_level = desc.levels()[i].level();
std::copy(current_level.begin(), current_level.end(),
std::back_inserter(levels));
lod.emplace_back(levels);
levels.clear();
}
this->set_lod(lod);
if (platform::is_cpu_place(dst_place)) {
memory::Copy(boost::get<platform::CPUPlace>(dst_place), ptr, src_place,
s.c_str() + sizeof(size_t) * 2 + DESC_SIZE, DATA_SIZE);
}
#ifdef PADDLE_WITH_GPU
if (platform::is_gpu_place(dst_place)) {
memory::Copy(boost::get<platform::GPUPlace>(dst_place), ptr, src_place,
s.c_str() + sizeof(size_t) * 2 + DESC_SIZE, DATA_SIZE);
}
#endif
}
} // namespace framework
} // namespace paddle

@ -85,7 +85,9 @@ class LoDTensor : public Tensor {
void set_lod(const LoD& lod) { lod_ = lod; }
LoD lod() const { return lod_; }
const LoD& lod() const { return lod_; }
LoD* mutable_lod() { return &lod_; }
/*
* Get the start offset and end offset of an element from LoD.
@ -139,27 +141,6 @@ class LoDTensor : public Tensor {
*/
void ShrinkInLevel(size_t level, size_t elem_begin, size_t elem_end);
/**
* @brief Serialize tensor to char bytes.
* Please check model_format.md for the format detail.
* NOTE: GPUTensor will copy data to cpu implicitly.
* @return return string
*/
// FIXME(dzh) : Currently, this interface should only be used in
// save/restore model and checkpoint. ParameterServer do not use shape
// information to do the optimization, as a result, when we serialize
// parameter/gradient to string, we should serialize the tensor
// to string in the ps trainer instead of LoDTensor.
std::string SerializeToString() const;
/**
* @brief Deserialize char bytes to tensor.
* @return return string
*/
void DeserializeFromString(const std::string& s,
const platform::Place& dst_place);
private:
LoD lod_;
};

@ -144,21 +144,5 @@ TEST(LodExpand, test) {
}
}
TEST_F(LoDTensorTester, SerializeDeserialize) {
LoDTensor new_lod_tensor = lod_tensor_;
float* src_ptr = lod_tensor_.data<float>();
std::string s = lod_tensor_.SerializeToString();
LoDTensor dst;
dst.DeserializeFromString(s, platform::CPUPlace());
float* dst_ptr = dst.data<float>();
for (int i = 0; i < kLodTensorSize; ++i) {
EXPECT_EQ(dst_ptr[i], src_ptr[i]);
}
ASSERT_EQ(dst.NumElements(0), 2UL);
ASSERT_EQ(dst.NumElements(1), 3UL);
ASSERT_EQ(dst.NumElements(2), 8UL);
}
} // namespace framework
} // namespace paddle

@ -47,31 +47,4 @@ TEST(LoDTensor, LoDInGPU) {
for (size_t i = 0; i < src_lod[0].size(); ++i) {
CHECK_EQ(lod[0].data()[i], src_lod[0].data()[i] * 2);
}
}
TEST(LoDTensor, SerializeDeserialize) {
paddle::framework::LoDTensor lod_tensor;
paddle::platform::GPUPlace place(0);
paddle::framework::LoD src_lod;
src_lod.push_back(std::vector<size_t>{0, 2, 4, 6, 8, 10, 12, 14});
lod_tensor.Resize({14, 16});
lod_tensor.mutable_data<float>(place);
lod_tensor.set_lod(src_lod);
CHECK_EQ(lod_tensor.lod_element(0, 2).first, 4UL);
CHECK_EQ(lod_tensor.lod_element(0, 4).first, 8UL);
test<<<1, 8>>>(src_lod[0].data(), src_lod[0].size());
cudaDeviceSynchronize();
std::string s = lod_tensor.SerializeToString();
paddle::framework::LoDTensor dst;
dst.DeserializeFromString(s, place);
paddle::framework::LoD dst_lod = dst.lod();
for (size_t i = 0; i < dst_lod[0].size(); ++i) {
CHECK_EQ(src_lod[0].data()[i], dst_lod[0].data()[i] * 2);
}
}
}

@ -14,9 +14,13 @@ limitations under the License. */
#include "paddle/framework/op_desc.h"
#include <functional>
#include <mutex>
#include <unordered_map>
#include "paddle/framework/block_desc.h"
#include "paddle/framework/operator.h"
#include "paddle/framework/program_desc.h"
#include "glog/logging.h"
namespace paddle {
namespace framework {
@ -24,16 +28,47 @@ namespace framework {
OpDescBind::OpDescBind(const std::string &type, const VariableNameMap &inputs,
const VariableNameMap &outputs,
const AttributeMap &attrs) {
op_desc_.set_type(type);
desc_.set_type(type);
inputs_ = inputs;
outputs_ = outputs;
attrs_ = attrs;
need_update_ = true;
}
OpDescBind::OpDescBind(const OpDesc &desc, ProgramDescBind *prog)
: desc_(desc), need_update_(false) {
// restore inputs_
int input_size = desc_.inputs_size();
for (int i = 0; i < input_size; ++i) {
const OpDesc::Var &var = desc_.inputs(i);
std::vector<std::string> &args = inputs_[var.parameter()];
int argu_size = var.arguments_size();
args.reserve(argu_size);
for (int j = 0; j < argu_size; ++j) {
args.push_back(var.arguments(j));
}
}
// restore outputs_
int output_size = desc_.outputs_size();
for (int i = 0; i < output_size; ++i) {
const OpDesc::Var &var = desc_.outputs(i);
std::vector<std::string> &args = outputs_[var.parameter()];
int argu_size = var.arguments_size();
args.reserve(argu_size);
for (int j = 0; j < argu_size; ++j) {
args.push_back(var.arguments(j));
}
}
// restore attrs_
for (const OpDesc::Attr &attr : desc_.attrs()) {
std::string attr_name = attr.name();
attrs_[attr_name] = GetAttrValue(attr, prog->Proto());
}
}
OpDesc *OpDescBind::Proto() {
Flush();
return &op_desc_;
return &desc_;
}
const std::vector<std::string> &OpDescBind::Input(
@ -167,23 +202,23 @@ struct SetAttrDescVisitor : public boost::static_visitor<void> {
void OpDescBind::Flush() {
if (need_update_) {
this->op_desc_.mutable_inputs()->Clear();
this->desc_.mutable_inputs()->Clear();
for (auto &ipt : inputs_) {
auto *input = op_desc_.add_inputs();
auto *input = desc_.add_inputs();
input->set_parameter(ipt.first);
VectorToRepeated(ipt.second, input->mutable_arguments());
}
this->op_desc_.mutable_outputs()->Clear();
this->desc_.mutable_outputs()->Clear();
for (auto &opt : outputs_) {
auto *output = op_desc_.add_outputs();
auto *output = desc_.add_outputs();
output->set_parameter(opt.first);
VectorToRepeated(opt.second, output->mutable_arguments());
}
this->op_desc_.mutable_attrs()->Clear();
this->desc_.mutable_attrs()->Clear();
for (auto &attr : attrs_) {
auto *attr_desc = op_desc_.add_attrs();
auto *attr_desc = desc_.add_attrs();
attr_desc->set_name(attr.first);
attr_desc->set_type(
static_cast<framework::AttrType>(attr.second.which() - 1));
@ -195,26 +230,26 @@ void OpDescBind::Flush() {
}
}
using InferShapeFuncMap =
std::unordered_map<std::string /*op_type*/,
std::function<void(InferShapeContext *)>>;
static InferShapeFuncMap &InferShapeFuncs() {
static InferShapeFuncMap *g_map = nullptr;
if (g_map == nullptr) {
g_map = new InferShapeFuncMap();
auto &info_map = OpInfoMap::Instance();
// all registered kernels
for (auto &pair : OperatorWithKernel::AllOpKernels()) {
auto &info = info_map.Get(pair.first);
// use empty type here to avoid runtime checks.
static std::once_flag init_infer_shape_funcs;
static void InitInferShapeFuncs() {
std::call_once(init_infer_shape_funcs, [] {
auto &map = OpInfoMap::Instance();
auto &info_map = *map.mutable_map();
for (auto &kern_pair : OperatorWithKernel::AllOpKernels()) {
auto op_type = kern_pair.first;
auto &op_info = info_map.at(op_type);
auto op =
static_cast<OperatorWithKernel *>(info.Creator()("", {}, {}, {}));
g_map->insert(
{pair.first, [op](InferShapeContext *ctx) { op->InferShape(ctx); }});
static_cast<OperatorWithKernel *>(op_info.Creator()("", {}, {}, {}));
if (op_info.infer_shape_) { // infer_shape has been registered.
continue;
}
op_info.infer_shape_ = [op](InferShapeContext *ctx) {
op->InferShape(ctx);
};
}
}
return *g_map;
});
}
void OpDescBind::CheckAttrs() {
@ -230,13 +265,13 @@ void OpDescBind::CheckAttrs() {
}
void OpDescBind::InferShape(const BlockDescBind &block) const {
auto &funcs = InferShapeFuncs();
auto it = funcs.find(this->Type());
if (it == funcs.end()) {
PADDLE_THROW("Operator %s has not been registered", this->Type());
}
VLOG(3) << "CompileTime infer shape on " << Type();
InitInferShapeFuncs();
auto &infer_shape = OpInfoMap::Instance().Get(this->Type()).infer_shape_;
PADDLE_ENFORCE(static_cast<bool>(infer_shape),
"%s's infer_shape has not been registered", this->Type());
CompileTimeInferShapeContext ctx(*this, block);
it->second(&ctx);
infer_shape(&ctx);
}
void OpDescBind::InferVarType(BlockDescBind *block) const {

@ -24,6 +24,7 @@ namespace paddle {
namespace framework {
class BlockDescBind;
class ProgramDescBind;
class OpDescBind {
public:
@ -32,11 +33,13 @@ class OpDescBind {
OpDescBind(const std::string &type, const VariableNameMap &inputs,
const VariableNameMap &outputs, const AttributeMap &attrs);
OpDescBind(const OpDesc &desc, ProgramDescBind *prog);
OpDesc *Proto();
std::string Type() const { return op_desc_.type(); }
std::string Type() const { return desc_.type(); }
void SetType(const std::string &type) { op_desc_.set_type(type); }
void SetType(const std::string &type) { desc_.set_type(type); }
const std::vector<std::string> &Input(const std::string &name) const;
@ -117,7 +120,7 @@ class OpDescBind {
return ret_val;
}
OpDesc op_desc_;
OpDesc desc_;
VariableNameMap inputs_;
VariableNameMap outputs_;
AttributeMap attrs_;

@ -25,12 +25,19 @@
namespace paddle {
namespace framework {
class InferShapeBase {
public:
virtual ~InferShapeBase() = default;
virtual void operator()(InferShapeContext*) const = 0;
};
struct OpInfo {
OpCreator creator_;
GradOpMakerFN grad_op_maker_;
OpProto* proto_{nullptr};
OpAttrChecker* checker_{nullptr};
InferVarTypeFN infer_var_type_;
InferShapeFN infer_shape_;
bool HasOpProtoAndChecker() const {
return proto_ != nullptr && checker_ != nullptr;
@ -87,13 +94,13 @@ class OpInfoMap {
}
}
const std::unordered_map<std::string, const OpInfo>& map() const {
return map_;
}
const std::unordered_map<std::string, OpInfo>& map() const { return map_; }
std::unordered_map<std::string, OpInfo>* mutable_map() { return &map_; }
private:
OpInfoMap() = default;
std::unordered_map<std::string, const OpInfo> map_;
std::unordered_map<std::string, OpInfo> map_;
DISABLE_COPY_AND_ASSIGN(OpInfoMap);
};

@ -33,24 +33,6 @@ ExecutionContext::GetEigenDevice<platform::GPUPlace, Eigen::GpuDevice>() const {
}
#endif
const Tensor* GetTensorFromVar(const Variable* var) {
if (var->IsType<LoDTensor>()) {
return &var->Get<LoDTensor>();
}
PADDLE_ENFORCE(var->IsType<Tensor>(),
"The Input must be LoDTensor or Tensor.");
return &var->Get<Tensor>();
}
Tensor* GetTensorFromVar(Variable* var) {
if (var->IsType<LoDTensor>()) {
return var->GetMutable<LoDTensor>();
}
PADDLE_ENFORCE(var->IsType<Tensor>(),
"The Input must be LoDTensor or Tensor.");
return var->GetMutable<Tensor>();
}
std::string OperatorBase::Input(const std::string& name) const {
auto& ins = Inputs(name);
PADDLE_ENFORCE_LE(ins.size(), 1UL,
@ -204,6 +186,30 @@ void OperatorBase::GenerateTemporaryNames() {
}
}
static const Tensor* GetTensorFromVar(const Variable* var) {
const Tensor* t = nullptr;
if (var->IsType<LoDTensor>()) {
t = &(var->Get<LoDTensor>());
} else if (var->IsType<SelectedRows>()) {
t = &(var->Get<SelectedRows>().value());
} else {
PADDLE_THROW("Variable type must be LoDTensor/SelectedRows.");
}
return t;
}
static Tensor* GetMutableTensorFromVar(Variable* var) {
Tensor* t = nullptr;
if (var->IsType<LoDTensor>()) {
t = var->GetMutable<LoDTensor>();
} else if (var->IsType<SelectedRows>()) {
t = var->GetMutable<SelectedRows>()->mutable_value();
} else {
PADDLE_THROW("Variable type must be LoDTensor/SelectedRows.");
}
return t;
}
template <>
const Tensor* ExecutionContext::Input<Tensor>(const std::string& name) const {
auto* var = InputVar(name);
@ -227,7 +233,7 @@ const std::vector<const Tensor*> ExecutionContext::MultiInput<Tensor>(
template <>
Tensor* ExecutionContext::Output<Tensor>(const std::string& name) const {
auto var = OutputVar(name);
return var == nullptr ? nullptr : var->GetMutable<LoDTensor>();
return var == nullptr ? nullptr : GetMutableTensorFromVar(var);
}
template <>
@ -240,7 +246,7 @@ std::vector<Tensor*> ExecutionContext::MultiOutput<Tensor>(
[&](const std::string& sub_name) {
auto var = scope_.FindVar(sub_name);
return var == nullptr ? nullptr
: var->GetMutable<LoDTensor>();
: GetMutableTensorFromVar(var);
});
return res;
}

@ -28,6 +28,7 @@ limitations under the License. */
#include "paddle/framework/lod_tensor.h"
#include "paddle/framework/op_info.h"
#include "paddle/framework/scope.h"
#include "paddle/framework/selected_rows.h"
#include "paddle/framework/shape_inference.h"
#include "paddle/framework/tensor.h"
#include "paddle/platform/device_context.h"
@ -60,9 +61,6 @@ inline std::string GradVarName(const std::string& var_name) {
class OperatorBase;
class ExecutionContext;
extern const Tensor* GetTensorFromVar(const Variable* var);
extern Tensor* GetTensorFromVar(Variable* var);
/**
* OperatorBase has the basic element that Net will call to do computation.
* Only CreateOperator from OpRegistry will new Operator directly. User
@ -414,7 +412,9 @@ class CompileTimeInferShapeContext : public InferShapeContext {
private:
DDim GetDim(const std::string& name) const override {
return framework::make_ddim(block_.FindVarRecursive(name)->Shape());
auto var = block_.FindVarRecursive(name);
PADDLE_ENFORCE(var != nullptr, "Cannot find variable %s", name);
return framework::make_ddim(var->Shape());
}
void SetDim(const std::string& name, const DDim& dim) override {
@ -511,28 +511,26 @@ class RuntimeInferShapeContext : public InferShapeContext {
}
private:
template <bool Allocate>
Tensor* GetTensor(const std::string& name) const {
Tensor* t = nullptr;
auto* var = scope_.FindVar(name);
if (!var->IsType<LoDTensor>() && !var->IsType<Tensor>()) {
if (Allocate) {
t = var->GetMutable<LoDTensor>();
} else {
PADDLE_THROW("Variable(%s) should be tensor", name);
}
DDim GetDim(const std::string& name) const override {
Variable* var = scope_.FindVar(name);
if (var->IsType<LoDTensor>()) {
return var->Get<LoDTensor>().dims();
} else if (var->IsType<SelectedRows>()) {
return var->Get<SelectedRows>().GetCompleteDims();
} else {
t = GetTensorFromVar(scope_.FindVar(name));
PADDLE_THROW("Variable type must be LoDTensor/SelectedRows.");
}
return t;
}
DDim GetDim(const std::string& name) const override {
return GetTensor<false>(name)->dims();
}
void SetDim(const std::string& name, const DDim& dim) override {
GetTensor<true>(name)->Resize(dim);
Variable* var = scope_.FindVar(name);
if (var->IsType<LoDTensor>()) {
var->GetMutable<LoDTensor>()->Resize(dim);
} else if (var->IsType<SelectedRows>()) {
var->GetMutable<SelectedRows>()->set_height(dim[0]);
} else {
PADDLE_THROW("Variable type must be LoDTensor/SelectedRows.");
}
}
const OperatorBase& op_;
@ -638,7 +636,9 @@ class OperatorWithKernel : public OperatorBase {
});
}
virtual void InferShape(InferShapeContext* ctx) const = 0;
virtual void InferShape(InferShapeContext* ctx) const {
OpInfoMap::Instance().Get(Type()).infer_shape_(ctx);
}
protected:
// indicate kernel DataType by input data. Defaultly all input data must be
@ -655,11 +655,14 @@ class OperatorWithKernel : public OperatorBase {
t = &var->Get<Tensor>();
} else if (var->IsType<LoDTensor>()) {
t = &var->Get<LoDTensor>();
} else if (var->IsType<SelectedRows>()) {
t = &(var->Get<SelectedRows>().value());
}
if (t != nullptr) {
int tmp = static_cast<int>(ToDataType(t->type()));
VLOG(3) << "Input " << ipt_name << " with data_type " << tmp;
PADDLE_ENFORCE(tmp == data_type || data_type == -1,
"DataType of Paddle Op must be same.");
"DataType of Paddle Op %s must be same.", Type());
data_type = tmp;
}
}

@ -237,12 +237,12 @@ TEST(OpKernel, multi_inputs) {
paddle::platform::CPUDeviceContext cpu_device_context;
paddle::framework::Scope scope;
scope.Var("x0")->GetMutable<Tensor>();
scope.Var("x1")->GetMutable<Tensor>();
scope.Var("x2")->GetMutable<Tensor>();
scope.Var("k0")->GetMutable<Tensor>();
scope.Var("y0")->GetMutable<Tensor>();
scope.Var("y1")->GetMutable<Tensor>();
scope.Var("x0")->GetMutable<LoDTensor>();
scope.Var("x1")->GetMutable<LoDTensor>();
scope.Var("x2")->GetMutable<LoDTensor>();
scope.Var("k0")->GetMutable<LoDTensor>();
scope.Var("y0")->GetMutable<LoDTensor>();
scope.Var("y1")->GetMutable<LoDTensor>();
auto op = paddle::framework::OpRegistry::CreateOp(op_desc, nullptr);
op->Run(scope, cpu_device_context);

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