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Paddle/python/paddle/fluid/reader.py

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# Copyright (c) 2019 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from . import core, dygraph
import sys
import six
import warnings
import numpy as np
import threading
import paddle
from .framework import Program, Variable, program_guard, default_main_program, default_startup_program, in_dygraph_mode
from .executor import global_scope
from .data_feeder import DataFeeder, BatchedTensorProvider, ListTensorProvider
from .layers.io import monkey_patch_reader_methods, _copy_reader_var_, double_buffer
from .unique_name import UniqueNameGenerator
import logging
__all__ = ['PyReader']
def _convert_places(places):
if not isinstance(places, (list, tuple)):
places = [places]
ret = []
for p in places:
if not isinstance(p, core.Place):
tmp = core.Place()
tmp.set_place(p)
p = tmp
ret.append(p)
return ret
class PyReader(object):
"""
Create a reader object for data feeding in Python.
Data would be prefetched using Python thread and be pushed
into a queue asynchronously. Data in the queue would be extracted
automatically when `Executor.run(...)` is called.
Args:
feed_list (list(Variable)|tuple(Variable)): feed variable list.
The variables should be created by :code:`fluid.layers.data()`.
it can be None under iterable mode.
capacity (int): capacity of the queue maintained in PyReader object.
use_double_buffer (bool): whether to use double_buffer_reader to
speed up data feeding.
iterable (bool): whether the created reader object is iterable.
return_list (bool): whether the return value presented as list.
Returns:
reader (Reader): the created reader object.
Examples:
1. If iterable = False, the created PyReader object is almost the
same as :code:`fluid.layers.py_reader()`. Operators would be
inserted into the program. User should call :code:`start()`
before each epoch and catch :code:`fluid.core.EOFException`
thrown by :code:`Executor.run()` when epoch ends. Once the
exception is caught, user should call :code:`reset()` to reset
the reader manually.
.. code-block:: python
import paddle
import paddle.fluid as fluid
import numpy as np
EPOCH_NUM = 3
ITER_NUM = 5
BATCH_SIZE = 3
def reader_creator_random_image_and_label(height, width):
def reader():
for i in range(ITER_NUM):
fake_image = np.random.uniform(low=0,
high=255,
size=[height, width])
fake_label = np.ones([1])
yield fake_image, fake_label
return reader
image = fluid.layers.data(name='image', shape=[784, 784], dtype='float32')
label = fluid.layers.data(name='label', shape=[1], dtype='int64')
reader = fluid.io.PyReader(feed_list=[image, label],
capacity=4,
iterable=False)
user_defined_reader = reader_creator_random_image_and_label(784, 784)
reader.decorate_sample_list_generator(
paddle.batch(user_defined_reader, batch_size=BATCH_SIZE))
# definition of network is omitted
executor = fluid.Executor(fluid.CUDAPlace(0))
executor.run(fluid.default_startup_program())
for i in range(EPOCH_NUM):
reader.start()
while True:
try:
executor.run(feed=None)
except fluid.core.EOFException:
reader.reset()
break
2. If iterable=True, the created PyReader object is decoupled with
the program. No operator would be inserted into the program.
In this case, the created reader is a Python generator, which
is iterable. User should feed the data yielded from PyReader
object into :code:`Executor.run(feed=...)`.
.. code-block:: python
import paddle
import paddle.fluid as fluid
import numpy as np
EPOCH_NUM = 3
ITER_NUM = 5
BATCH_SIZE = 10
def reader_creator_random_image(height, width):
def reader():
for i in range(ITER_NUM):
yield np.random.uniform(low=0, high=255, size=[height, width]),
return reader
image = fluid.layers.data(name='image', shape=[784, 784], dtype='float32')
reader = fluid.io.PyReader(feed_list=[image], capacity=4, iterable=True, return_list=False)
user_defined_reader = reader_creator_random_image(784, 784)
reader.decorate_sample_list_generator(
paddle.batch(user_defined_reader, batch_size=BATCH_SIZE),
fluid.core.CUDAPlace(0))
# definition of network is omitted
executor = fluid.Executor(fluid.CUDAPlace(0))
executor.run(fluid.default_main_program())
for _ in range(EPOCH_NUM):
for data in reader():
executor.run(feed=data)
3. If return_list=True, the return values would be presented as list instead of dict`.
.. code-block:: python
import paddle
import paddle.fluid as fluid
import numpy as np
EPOCH_NUM = 3
ITER_NUM = 5
BATCH_SIZE = 10
def reader_creator_random_image(height, width):
def reader():
for i in range(ITER_NUM):
yield np.random.uniform(low=0, high=255, size=[height, width]),
return reader
image = fluid.layers.data(name='image', shape=[784, 784], dtype='float32')
reader = fluid.io.PyReader(feed_list=[image], capacity=4, iterable=True, return_list=True)
user_defined_reader = reader_creator_random_image(784, 784)
reader.decorate_sample_list_generator(
paddle.batch(user_defined_reader, batch_size=BATCH_SIZE),
fluid.core.CPUPlace())
# definition of network is omitted
executor = fluid.Executor(fluid.core.CPUPlace())
executor.run(fluid.default_main_program())
for _ in range(EPOCH_NUM):
for data in reader():
executor.run(feed={"image": data[0]})
"""
unique_name_generator = UniqueNameGenerator()
def __init__(self,
feed_list=None,
capacity=None,
use_double_buffer=True,
iterable=True,
return_list=False):
self._tensor_reader = None
self._thread = None
self._feed_list = feed_list
if not capacity:
raise ValueError("Please give value to capacity.")
# force to use iterable mode under dygraph mode
if in_dygraph_mode():
if not iterable:
warnings.warn(
"Please NOTE: dygraph can support iterable mode only.")
self._iterable = True
if not return_list:
warnings.warn(
"Please NOTE: dygraph can support return as list only.")
self._return_list = True
else:
self._iterable = iterable
self._return_list = return_list
if not self._feed_list:
raise Exception("Feed list must be given under static mode.")
self._use_double_buffer = use_double_buffer
self._capacity = capacity
if not self._iterable:
self._init_non_iterable()
def _init_iterable(self, places):
if in_dygraph_mode():
self._var_names = []
else:
self._var_names = [v.name for v in self._feed_list]
self._places = _convert_places(places)
self._queue = core.init_lod_tensor_blocking_queue(core.Variable(),
self._capacity)
self._reader = core.create_py_reader(
self.queue, self._var_names, self._places, self._use_double_buffer)
def _init_non_iterable(self):
lod_levels = []
dtypes = []
shape_concat = []
ranks = []
shapes = []
for feed_data in self._feed_list:
dtypes.append(feed_data.dtype)
shape_concat.extend(feed_data.shape)
ranks.append(len(feed_data.shape))
shapes.append(feed_data.shape)
lod_levels.append(feed_data.lod_level)
queue_name = PyReader.unique_name_generator('lod_tensor_blocking_queue')
reader_name = PyReader.unique_name_generator('create_py_reader')
double_buffer_name = PyReader.unique_name_generator('double_buffer')
var = global_scope().var(queue_name)
self._queue = core.init_lod_tensor_blocking_queue(var, self._capacity)
startup_blk = default_startup_program().current_block()
startup_var = startup_blk.create_var(name=reader_name)
startup_blk.append_op(
type='create_py_reader',
inputs={'blocking_queue': [queue_name]},
outputs={'Out': [startup_var]},
attrs={
'shape_concat': shape_concat,
'lod_levels': lod_levels,
'ranks': ranks
})
startup_var.desc.set_dtypes(dtypes)
startup_var.persistable = True
main_prog_var = _copy_reader_var_(
default_main_program().current_block(), startup_var)
main_prog_var.stop_gradient = True
main_prog_var.persistable = True
reader = monkey_patch_reader_methods(main_prog_var)
if self._use_double_buffer:
double_buffer_reader = double_buffer(
reader, name=double_buffer_name)
# we return a double buffer reader. However, the reset method comes from
# py_reader.
double_buffer_reader.reset = reader.reset
reader = double_buffer_reader
self._reader = reader
default_main_program().current_block().append_op(
type='read',
inputs={'Reader': [self._reader]},
outputs={'Out': self._feed_list})
@property
def queue(self):
return self._queue
@property
def iterable(self):
return self._iterable
def __call__(self):
assert self.iterable, "PyReader is not iterable"
assert self._tensor_reader is not None, \
"Data source of PyReader has not set yet"
class Iterator(object):
def __init__(self, reader):
self._reader = reader._reader
self._reset = reader._reset
self._return_list = reader._return_list
def __iter__(self):
return self
def __next__(self):
return self.next()
def next(self):
if not in_dygraph_mode():
if self._return_list:
ret = self._reader.read_next_list()
ret = ret[0] if ret is not None and len(
ret) > 0 else None
else:
ret = self._reader.read_next()
if ret:
return ret
else:
self._reset()
raise StopIteration
else:
ret = self._reader.read_next_list()
if ret and ret[0]:
return [
dygraph.base.to_variable(np.array(v))
for v in ret[0]
]
else:
self._reset()
raise StopIteration
self._start()
return Iterator(self)
def _reset(self):
self._reader.reset()
self._thread.join()
def start(self):
'''
Start the data feeding thread.
Can only call when the reader object is not iterable.
Example:
.. code-block:: python
import paddle
import paddle.fluid as fluid
import numpy as np
BATCH_SIZE = 10
def generator():
for i in range(5):
yield np.random.uniform(low=0, high=255, size=[784, 784]),
image = fluid.layers.data(name='image', shape=[784, 784], dtype='float32')
reader = fluid.io.PyReader(feed_list=[image], capacity=4, iterable=False)
reader.decorate_sample_list_generator(
paddle.batch(generator, batch_size=BATCH_SIZE))
executor = fluid.Executor(fluid.CUDAPlace(0))
executor.run(fluid.default_startup_program())
for i in range(3):
reader.start()
while True:
try:
executor.run(feed=None)
except fluid.core.EOFException:
reader.reset()
break
'''
if not in_dygraph_mode():
assert not self._iterable, "start() cannot be called when PyReader is iterable"
self._start()
def reset(self):
'''
Reset the reader object when :code:`fluid.core.EOFException` raises.
Can only call when the reader object is not iterable.
Example:
.. code-block:: python
import paddle
import paddle.fluid as fluid
import numpy as np
BATCH_SIZE = 10
def generator():
for i in range(5):
yield np.random.uniform(low=0, high=255, size=[784, 784]),
image = fluid.layers.data(name='image', shape=[784, 784], dtype='float32')
reader = fluid.io.PyReader(feed_list=[image], capacity=4, iterable=False)
reader.decorate_sample_list_generator(
paddle.batch(generator, batch_size=BATCH_SIZE))
executor = fluid.Executor(fluid.CUDAPlace(0))
executor.run(fluid.default_startup_program())
for i in range(3):
reader.start()
while True:
try:
executor.run(feed=None)
except fluid.core.EOFException:
reader.reset()
break
'''
if not in_dygraph_mode():
assert not self._iterable, "reset() cannot be called when PyReader is iterable"
self._reset()
def _start(self):
def __thread_main__():
try:
for tensors in self._tensor_reader():
array = core.LoDTensorArray()
for item in tensors:
if not isinstance(item, core.LoDTensor):
tmp = core.LoDTensor()
tmp.set(item, core.CPUPlace())
item = tmp
array.append(item)
if not self._queue.push(array):
break
self._queue.close()
except Exception as ex:
self._queue.close()
logging.warn('Your decorated reader has raised an exception!')
six.reraise(*sys.exc_info())
self._thread = threading.Thread(target=__thread_main__)
self._thread.daemon = True
self._thread.start()
def decorate_sample_generator(self,
sample_generator,
batch_size,
drop_last=True,
places=None):
'''
Set the data source of the PyReader object.
The provided :code:`sample_generator` should be a Python generator,
which yields list(numpy.ndarray)-typed data of each sample.
:code:`places` must be set when the PyReader object is iterable.
If all inputs have no lods, this method is faster than
:code:`decorate_sample_list_generator(paddle.batch(sample_generator, ...))` .
Args:
sample_generator (generator): Python generator that yields
list(numpy.ndarray)-typed sample data.
batch_size (int): batch size. Must be larger than 0.
drop_last (bool): Whether to drop the last batch when sample number
is less than batch_size.
places (None|list(CUDAPlace)|list(CPUPlace)): place list. Must
be provided when PyReader is iterable.
Example:
.. code-block:: python
import paddle.fluid as fluid
import numpy as np
EPOCH_NUM = 3
ITER_NUM = 15
BATCH_SIZE = 3
def random_image_and_label_generator(height, width):
def generator():
for i in range(ITER_NUM):
fake_image = np.random.uniform(low=0,
high=255,
size=[height, width])
fake_label = np.array([1])
yield fake_image, fake_label
return generator
image = fluid.layers.data(name='image', shape=[784, 784], dtype='float32')
label = fluid.layers.data(name='label', shape=[1], dtype='int32')
reader = fluid.io.PyReader(feed_list=[image, label], capacity=4, iterable=True)
user_defined_generator = random_image_and_label_generator(784, 784)
reader.decorate_sample_generator(user_defined_generator,
batch_size=BATCH_SIZE,
places=[fluid.CUDAPlace(0)])
# definition of network is omitted
executor = fluid.Executor(fluid.CUDAPlace(0))
executor.run(fluid.default_main_program())
for _ in range(EPOCH_NUM):
for data in reader():
executor.run(feed=data)
'''
assert batch_size > 0, "batch_size must be larger than 0"
if not in_dygraph_mode():
has_lod = False
for f in self._feed_list:
if f.lod_level != 0:
has_lod = True
break
if has_lod:
self.decorate_sample_list_generator(
paddle.batch(
sample_generator,
batch_size=batch_size,
drop_last=drop_last),
places=places)
else:
reader = BatchedTensorProvider(
feed_list=self._feed_list,
place=core.CPUPlace(),
batch_size=batch_size,
generator=sample_generator,
drop_last=drop_last)
self.decorate_batch_generator(reader, places=places)
else:
self.decorate_sample_list_generator(
paddle.batch(
sample_generator,
batch_size=batch_size,
drop_last=drop_last),
places=places)
def decorate_sample_list_generator(self, reader, places=None):
'''
Set the data source of the PyReader object.
The provided :code:`reader` should be a Python generator,
which yields list(numpy.ndarray) typed batched data.
:code:`places` must be set when the PyReader object is iterable.
Args:
reader (generator): Python generator that yields
list(numpy.ndarray)-typed batched data.
places (None|list(CUDAPlace)|list(CPUPlace)): place list. Must
be provided when PyReader is iterable.
Example:
.. code-block:: python
import paddle
import paddle.fluid as fluid
import numpy as np
EPOCH_NUM = 3
ITER_NUM = 15
BATCH_SIZE = 3
def random_image_and_label_generator(height, width):
def generator():
for i in range(ITER_NUM):
fake_image = np.random.uniform(low=0,
high=255,
size=[height, width])
fake_label = np.ones([1])
yield fake_image, fake_label
return generator
image = fluid.layers.data(name='image', shape=[784, 784], dtype='float32')
label = fluid.layers.data(name='label', shape=[1], dtype='int32')
reader = fluid.io.PyReader(feed_list=[image, label], capacity=4, iterable=True)
user_defined_generator = random_image_and_label_generator(784, 784)
reader.decorate_sample_list_generator(
paddle.batch(user_defined_generator, batch_size=BATCH_SIZE),
fluid.core.CUDAPlace(0))
# definition of network is omitted
executor = fluid.Executor(fluid.core.CUDAPlace(0))
executor.run(fluid.default_main_program())
for _ in range(EPOCH_NUM):
for data in reader():
executor.run(feed=data)
'''
assert self._tensor_reader is None, \
"Cannot reset the data source of PyReader"
if not in_dygraph_mode():
with program_guard(Program(), Program()):
feeder = DataFeeder(
feed_list=self._feed_list, place=core.CPUPlace())
paddle_reader = feeder.decorate_reader(
reader, multi_devices=False)
def __tensor_reader_impl__():
for slots in paddle_reader():
yield [slots[var.name] for var in self._feed_list]
else:
provider = ListTensorProvider(reader, places)
def __tensor_reader_impl__():
for slots in provider():
yield slots[0]
self.decorate_batch_generator(__tensor_reader_impl__, places)
def decorate_batch_generator(self, reader, places=None):
'''
Set the data source of the PyReader object.
The provided :code:`reader` should be a Python generator,
which yields numpy.ndarray-typed or LoDTensor-typed batched data.
:code:`places` must be set when the PyReader object is iterable.
Args:
reader (generator): Python generator that yields LoDTensor-typed
batched data.
places (None|list(CUDAPlace)|list(CPUPlace)): place list. Must
be provided when PyReader is iterable.
Example:
.. code-block:: python
import paddle.fluid as fluid
import numpy as np
EPOCH_NUM = 3
ITER_NUM = 15
BATCH_SIZE = 3
def random_image_and_label_generator(height, width):
def generator():
for i in range(ITER_NUM):
batch_image = np.random.uniform(low=0,
high=255,
size=[BATCH_SIZE, height, width])
batch_label = np.ones([BATCH_SIZE, 1])
yield batch_image, batch_label
return generator
image = fluid.layers.data(name='image', shape=[784, 784], dtype='float32')
label = fluid.layers.data(name='label', shape=[1], dtype='int32')
reader = fluid.io.PyReader(feed_list=[image, label], capacity=4, iterable=True)
user_defined_generator = random_image_and_label_generator(784, 784)
reader.decorate_batch_generator(user_defined_generator, fluid.CUDAPlace(0))
# definition of network is omitted
executor = fluid.Executor(fluid.CUDAPlace(0))
executor.run(fluid.default_main_program())
for _ in range(EPOCH_NUM):
for data in reader():
executor.run(feed=data)
'''
assert self._tensor_reader is None, \
"Cannot reset the data source of PyReader"
self._tensor_reader = reader
if self._iterable:
assert places is not None, "Places cannot be None when py_reader is iterable"
self._init_iterable(places)