Merge branch 'develop' of https://github.com/PaddlePaddle/Paddle into change_manylinux1_Docker

revert-12469-sum_op_dim_fix
minqiyang 7 years ago
commit ba84a6b7ed

@ -23,7 +23,7 @@ repos:
- id: clang-format-with-version-check
name: clang-format
description: Format files with ClangFormat.
entry: bash ./.clang_format.hook -i
entry: bash ./tools/codestyle/clang_format.hook -i
language: system
files: \.(c|cc|cxx|cpp|cu|h|hpp|hxx|proto)$
- repo: local
@ -52,7 +52,7 @@ repos:
hooks:
- id: copyright_checker
name: copyright_checker
entry: python ./.copyright.hook
entry: python ./tools/codestyle/copyright.hook
language: system
files: \.(c|cc|cxx|cpp|cu|h|hpp|hxx|proto|py)$
exclude: (?!.*third_party)^.*$ | (?!.*book)^.*$

@ -27,15 +27,6 @@ script:
# 43min timeout
paddle/scripts/paddle_docker_build.sh ${JOB}
if [ $? -eq 0 ] || [ $? -eq 142 ]; then true; else exit 1; fi;
- |
if [[ "$JOB" != "doc" ]]; then exit 0; fi;
# For document only
if [[ "$TRAVIS_PULL_REQUEST" != "false" ]]; then exit 0; fi;
if [[ "$TRAVIS_BRANCH" != "develop" && ! "$TRAVIS_BRANCH" =~ ^v[[:digit:]]+\.[[:digit:]]+(\.[[:digit:]]+)?(-\S*)?$ ]]; then exit 0; fi;
export DEPLOY_DOCS_SH=https://raw.githubusercontent.com/PaddlePaddle/PaddlePaddle.org/master/scripts/deploy/deploy_docs.sh
export DOCS_DIR=`pwd`
cd ..
curl $DEPLOY_DOCS_SH | bash -s $CONTENT_DEC_PASSWD $TRAVIS_BRANCH $DOCS_DIR $DOCS_DIR/build/doc/
notifications:
email:
on_success: change

@ -22,6 +22,7 @@
| jczaja | Jacek Czaja |
| JiayiFeng | Jia-Yi Feng |
| kbinias | Krzysztof Binias |
| kexinzhao | Ke-Xin Zhao |
| kuke | Yi-Bing Liu |
| lcy-seso | Ying Cao |
| lipeng-unisound | Peng Li |
@ -45,6 +46,7 @@
| tianbingsz | Tian-Bing Xu |
| tpatejko | Tomasz Patejko |
| typhoonzero | Yi Wu |
| velconia | Qi-Yang Min |
| wanghaoshuang | Hao-Shuang Wang |
| wangyang59 | Yang Wang |
| wangzhen-nlp | Zhen Wang |

@ -55,12 +55,25 @@ option(WITH_FLUID_ONLY "Compile PaddlePaddle fluid only" OFF)
option(WITH_GOLANG "Compile PaddlePaddle with GOLANG" OFF)
option(GLIDE_INSTALL "Download and install go dependencies " ON)
option(USE_NNPACK "Compile PaddlePaddle with NNPACK library" OFF)
option(WITH_DISTRIBUTE "Compile with grpc distributed support" OFF)
option(WITH_DISTRIBUTE "Compile with distributed support" OFF)
option(USE_EIGEN_FOR_BLAS "Use matrix multiplication in Eigen" OFF)
option(EIGEN_USE_THREADS "Compile with multi-threaded Eigen" OFF)
option(WITH_ARM_FP16 "Use half precision support on armv8.2-a cpu" OFF)
option(WITH_FAST_BUNDLE_TEST "Bundle tests that can be run in a single process together to reduce launch overhead" OFF)
option(WITH_CONTRIB "Compile the third-party contributation" OFF)
option(REPLACE_ENFORCE_GLOG "Replace PADDLE_ENFORCE with glog/CHECK for better debug." OFF)
option(WITH_ANAKIN "Compile with Anakin library" OFF)
option(WITH_GRPC "Use grpc as the default rpc framework" ${WITH_DISTRIBUTE})
option(WITH_BRPC_RDMA "Use brpc rdma as the rpc protocal" OFF)
option(WITH_INFERENCE "Compile fluid inference library" ON)
option(WITH_SYSTEM_BLAS "Use system blas library" OFF)
option(PY_VERSION "Compile PaddlePaddle with python3 support" ${PY_VERSION})
# PY_VERSION
if(NOT PY_VERSION)
set(PY_VERSION 2.7)
endif()
set(PYBIND11_PYTHON_VERSION ${PY_VERSION})
# CMAKE_BUILD_TYPE
if(NOT CMAKE_BUILD_TYPE)
@ -98,6 +111,11 @@ if(ANDROID OR IOS)
add_definitions(-DPADDLE_MOBILE_INFERENCE)
endif()
if (APPLE OR WIN32)
set(WITH_MKL OFF CACHE STRING
"Disable MKL for building on mac and windows" FORCE)
endif()
set(THIRD_PARTY_PATH "${CMAKE_BINARY_DIR}/third_party" CACHE STRING
"A path setting third party libraries download & build directories.")
@ -120,6 +138,12 @@ else()
set(THIRD_PARTY_BUILD_TYPE Release)
endif()
if(WITH_MKL)
option(MKL_SPLIT_GEMM "PaddlePaddle MKL gemm would split to small ones" OFF)
if (MKL_SPLIT_GEMM)
add_definitions(-DPADDLE_MKL_SPLIT_GEMM)
endif()
endif()
set(WITH_MKLML ${WITH_MKL})
if (NOT DEFINED WITH_MKLDNN)
if (WITH_MKL AND AVX2_FOUND)
@ -129,9 +153,15 @@ if (NOT DEFINED WITH_MKLDNN)
set(WITH_MKLDNN OFF)
endif()
endif()
if (REPLACE_ENFORCE_GLOG)
add_definitions("-DREPLACE_ENFORCE_GLOG")
endif()
########################################################################################
include(external/mklml) # download mklml package
include(external/xbyak) # download xbyak package
include(external/libxsmm) # download, build, install libxsmm
include(external/zlib) # download, build, install zlib
include(external/gflags) # download, build, install gflags
include(external/glog) # download, build, install glog
@ -147,11 +177,40 @@ include(external/any) # download libn::any
include(external/eigen) # download eigen3
include(external/pybind11) # download pybind11
include(external/cares)
include(external/grpc)
include(external/cub)
if(WITH_DISTRIBUTE)
if(WITH_GRPC)
include(external/grpc)
message(STATUS "Use grpc framework.")
else()
message(STATUS "Use brpc framework.")
include(external/leveldb)
include(external/brpc)
endif()
endif()
if(WITH_BRPC_RDMA)
message(STATUS "Use brpc with rdma.")
if(WITH_GRPC)
message(FATAL_ERROR "Can't use grpc with brpc rdma.")
endif()
if(NOT WITH_DISTRIBUTE)
message(FATAL_ERROR "Can't use brpc rdma in no distribute env.")
endif()
endif()
include(external/snappy) # download snappy
include(external/snappystream)
include(external/threadpool)
set(WITH_ANAKIN OFF CACHE STRING "Disable Anakin first, will add it later." FORCE)
if(WITH_GPU)
include(cuda)
include(tensorrt)
include(external/anakin)
endif()
include(cudnn) # set cudnn libraries, must before configure
include(cupti)
include(configure) # add paddle env configuration
@ -167,7 +226,7 @@ include(inference_lib) # add paddle fluid inference libraries
include_directories("${PADDLE_SOURCE_DIR}")
include_directories("${PADDLE_SOURCE_DIR}/paddle/cuda/include")
include_directories("${PADDLE_SOURCE_DIR}/paddle/legacy/cuda/include")
include_directories("${CMAKE_CURRENT_BINARY_DIR}/proto")
include_directories("${CMAKE_CURRENT_BINARY_DIR}/go/pserver/client/c")
@ -180,11 +239,6 @@ set(EXTERNAL_LIBS
${PYTHON_LIBRARIES}
)
if(WITH_GPU)
include(cuda)
include(tensorrt)
endif(WITH_GPU)
if(WITH_AMD_GPU)
find_package(HIP)
include(hip)
@ -194,6 +248,10 @@ if(WITH_MKLML)
list(APPEND EXTERNAL_LIBS ${MKLML_IOMP_LIB})
endif()
if(WITH_LIBXSMM)
list(APPEND EXTERNAL_LIBS ${LIBXSMM_LIBS})
endif()
if(WITH_MKLDNN)
list(APPEND EXTERNAL_LIBS ${MKLDNN_LIB})
endif()
@ -208,7 +266,7 @@ add_subdirectory(proto)
if(NOT MOBILE_INFERENCE AND NOT WITH_FLUID_ONLY)
# "add_subdirectory(go)" should be placed after the following loine,
# because it depends on paddle/optimizer.
add_subdirectory(paddle/optimizer)
add_subdirectory(paddle/legacy/optimizer)
endif()
# "add_subdirectory(paddle)" and "add_subdirectory(python)" should be
@ -233,7 +291,3 @@ if(WITH_DOC)
find_python_module(recommonmark REQUIRED)
add_subdirectory(doc)
endif()
if (WITH_CONTRIB)
add_subdirectory(paddle/contrib)
endif()

@ -159,4 +159,4 @@ This will enable VLOG messages generated by `buddy_allocator.{h,cc}` and in the
- verbose level 1: [framework](https://github.com/PaddlePaddle/Paddle/tree/develop/paddle/framework)
- verbose level 3: [operators](https://github.com/PaddlePaddle/Paddle/tree/develop/paddle/operators)
- verbose level 5: [memory](https://github.com/PaddlePaddle/Paddle/tree/develop/paddle/memory), [platform](https://github.com/PaddlePaddle/Paddle/tree/develop/paddle/platform)
- verbose level 7: [math](https://github.com/PaddlePaddle/Paddle/tree/develop/paddle/math)
- verbose level 7: [math](https://github.com/PaddlePaddle/Paddle/tree/develop/paddle/legacy/math)

@ -23,8 +23,8 @@ ENV HOME /root
COPY ./paddle/scripts/docker/root/ /root/
RUN apt-get update && \
apt-get install -y --allow-downgrades \
git python-pip python-dev openssh-server bison \
apt-get install -y --allow-downgrades patchelf \
git python-pip python-dev python-opencv openssh-server bison \
libnccl2=2.1.2-1+cuda8.0 libnccl-dev=2.1.2-1+cuda8.0 \
wget unzip unrar tar xz-utils bzip2 gzip coreutils ntp \
curl sed grep graphviz libjpeg-dev zlib1g-dev \
@ -80,7 +80,7 @@ RUN pip install pre-commit 'ipython==5.3.0' && \
pip install opencv-python
#For docstring checker
RUN pip install pylint pytest astroid isort
RUN pip install pylint pytest astroid isort LinkChecker
COPY ./python/requirements.txt /root/
RUN pip install -r /root/requirements.txt

@ -4,7 +4,6 @@
[![Build Status](https://travis-ci.org/PaddlePaddle/Paddle.svg?branch=develop)](https://travis-ci.org/PaddlePaddle/Paddle)
[![Documentation Status](https://img.shields.io/badge/docs-latest-brightgreen.svg?style=flat)](http://www.paddlepaddle.org/docs/develop/documentation/en/getstarted/index_en.html)
[![Documentation Status](https://img.shields.io/badge/中文文档-最新-brightgreen.svg)](http://www.paddlepaddle.org/docs/develop/documentation/zh/getstarted/index_cn.html)
[![Coverage Status](https://coveralls.io/repos/github/PaddlePaddle/Paddle/badge.svg?branch=develop)](https://coveralls.io/github/PaddlePaddle/Paddle?branch=develop)
[![Release](https://img.shields.io/github/release/PaddlePaddle/Paddle.svg)](https://github.com/PaddlePaddle/Paddle/releases)
[![License](https://img.shields.io/badge/license-Apache%202-blue.svg)](LICENSE)
@ -19,6 +18,22 @@ learning to many products at Baidu.
Our vision is to enable deep learning for everyone via PaddlePaddle.
Please refer to our [release announcement](https://github.com/PaddlePaddle/Paddle/releases) to track the latest feature of PaddlePaddle.
### Latest PaddlePaddle Release: [Fluid 0.14.0](https://github.com/PaddlePaddle/Paddle/tree/v0.14.0)
### Install Latest Stable Release:
```
# Linux CPU
pip install paddlepaddle
# Linux GPU cuda9cudnn7
pip install paddlepaddle-gpu
# Linux GPU cuda8cudnn7
pip install paddlepaddle-gpu==0.14.0.post87
# Linux GPU cuda8cudnn5
pip install paddlepaddle-gpu==0.14.0.post85
# For installation on other platform, refer to http://paddlepaddle.org/
```
## Features
- **Flexibility**

@ -7,3 +7,6 @@ paddle/rnn/imdb.pkl
caffe/image/logs
tensorflow/image/logs
tensorflow/rnn/logs
fluid/models/*.pyc
fluid/logs
fluid/nohup.out

@ -0,0 +1,31 @@
FROM nvidia/cuda:9.0-cudnn7-devel-ubuntu16.04
# Use UBUNTU_MIRROR can speed up apt-get speed.
# ARG UBUNTU_MIRROR
# RUN /bin/bash -c 'if [[ -n ${UBUNTU_MIRROR} ]]; then sed -i 's#http://archive.ubuntu.com/ubuntu#${UBUNTU_MIRROR}#g' /etc/apt/sources.list; fi'
RUN apt-get update && apt-get install -y python python-pip iputils-ping libgtk2.0-dev wget vim net-tools iftop python-opencv
RUN ln -s /usr/lib/x86_64-linux-gnu/libcudnn.so.7 /usr/lib/libcudnn.so && ln -s /usr/lib/x86_64-linux-gnu/libnccl.so.2 /usr/lib/libnccl.so
# IMPORTANT:
# Add "ENV http_proxy=http://ip:port" if your download is slow, and don't forget to unset it at runtime.
# exmaple: unset http_proxy && unset https_proxy && python fluid_benchmark.py ...
RUN pip install -U pip
RUN pip install -U kubernetes paddlepaddle
RUN sh -c 'echo "import paddle.v2 as paddle\npaddle.dataset.cifar.train10()\npaddle.dataset.flowers.fetch()" | python'
RUN sh -c 'echo "import paddle.v2 as paddle\npaddle.dataset.mnist.train()\npaddle.dataset.mnist.test()\npaddle.dataset.imdb.fetch()" | python'
RUN sh -c 'echo "import paddle.v2 as paddle\npaddle.dataset.imikolov.fetch()" | python'
RUN pip uninstall -y paddlepaddle && mkdir /workspace
ADD https://raw.githubusercontent.com/PaddlePaddle/cloud/develop/docker/paddle_k8s /usr/bin
ADD https://raw.githubusercontent.com/PaddlePaddle/cloud/develop/docker/k8s_tools.py /root
RUN chmod +x /usr/bin/paddle_k8s
ADD *.whl /
RUN pip install /*.whl && rm -f /*.whl
ENV LD_LIBRARY_PATH=/usr/local/lib
ADD fluid_benchmark.py recordio_converter.py args.py recordio_converter.py run.sh run_fluid_benchmark.sh /workspace/
ADD models/ /workspace/models/

@ -24,14 +24,18 @@ Currently supported `--model` argument include:
* Run the following command to start a benchmark job locally:
```bash
python fluid_benchmark.py --model mnist --device GPU
python fluid_benchmark.py --model mnist --device GPU
```
You can choose to use GPU/CPU training. With GPU training, you can specify
`--gpus <gpu_num>` to run multi GPU training.
You can set async mode parameter server. With async mode, you can specify
`--async_mode` to train model asynchronous.
* Run distributed training with parameter servers:
* see [run_fluid_benchmark.sh](https://github.com/PaddlePaddle/Paddle/blob/develop/benchmark/fluid/run_fluid_benchmark.sh) as an example.
* start parameter servers:
```bash
PADDLE_TRAINING_ROLE=PSERVER PADDLE_PSERVER_PORT=7164 PADDLE_PSERVER_IPS=127.0.0.1 PADDLE_TRAINERS=1 PADDLE_CURRENT_IP=127.0.0.1 PADDLE_TRAINER_ID=0 python fluid_benchmark.py --model mnist --device GPU --update_method pserver
sleep 15
```
* start trainers:
```bash
@ -42,13 +46,37 @@ Currently supported `--model` argument include:
PADDLE_PSERVER_PORT=7164 PADDLE_TRAINER_IPS=192.168.0.2,192.168.0.3 PADDLE_CURRENT_IP=127.0.0.1 PADDLE_TRAINER_ID=0 python fluid_benchmark.py --model mnist --device GPU --update_method nccl2
```
## Prepare the RecordIO file to Achieve Better Performance
Run the following command will generate RecordIO files like "mnist.recordio" under the path
and batch_size you choose, you can use batch_size=1 so that later reader can change the batch_size
at any time using `fluid.batch`.
```bash
python -c 'from recordio_converter import *; prepare_mnist("data", 1)'
```
## Run Distributed Benchmark on Kubernetes Cluster
You may need to build a Docker image before submitting a cluster job onto Kubernetes, or you will
have to start all those processes mannually on each node, which is not recommended.
To build the Docker image, you need to choose a paddle "whl" package to run with, you may either
download it from
http://www.paddlepaddle.org/docs/develop/documentation/zh/build_and_install/pip_install_en.html or
build it by your own. Once you've got the "whl" package, put it under the current directory and run:
```bash
docker build -t [your docker image name]:[your docker image tag] .
```
Then push the image to a Docker registry that your Kubernetes cluster can reach.
We provide a script `kube_gen_job.py` to generate Kubernetes yaml files to submit
distributed benchmark jobs to your cluster. To generate a job yaml, just run:
```bash
python kube_gen_job.py --jobname myjob --pscpu 4 --cpu 8 --gpu 8 --psmemory 20 --memory 40 --pservers 4 --trainers 4 --entry "python fluid_benchmark.py --model mnist --parallel 1 --device GPU --update_method pserver " --disttype pserver
python kube_gen_job.py --jobname myjob --pscpu 4 --cpu 8 --gpu 8 --psmemory 20 --memory 40 --pservers 4 --trainers 4 --entry "python fluid_benchmark.py --model mnist --gpus 8 --device GPU --update_method pserver " --disttype pserver
```
Then the yaml files are generated under directory `myjob`, you can run:

@ -0,0 +1,134 @@
# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import argparse
__all__ = ['parse_args', ]
BENCHMARK_MODELS = [
"machine_translation", "resnet", "vgg", "mnist", "stacked_dynamic_lstm"
]
def parse_args():
parser = argparse.ArgumentParser('Fluid model benchmarks.')
parser.add_argument(
'--model',
type=str,
choices=BENCHMARK_MODELS,
default='resnet',
help='The model to run benchmark with.')
parser.add_argument(
'--batch_size', type=int, default=32, help='The minibatch size.')
# args related to learning rate
parser.add_argument(
'--learning_rate', type=float, default=0.001, help='The learning rate.')
# TODO(wuyi): add "--use_fake_data" option back.
parser.add_argument(
'--skip_batch_num',
type=int,
default=5,
help='The first num of minibatch num to skip, for better performance test'
)
parser.add_argument(
'--iterations', type=int, default=80, help='The number of minibatches.')
parser.add_argument(
'--pass_num', type=int, default=100, help='The number of passes.')
parser.add_argument(
'--data_format',
type=str,
default='NCHW',
choices=['NCHW', 'NHWC'],
help='The data data_format, now only support NCHW.')
parser.add_argument(
'--device',
type=str,
default='GPU',
choices=['CPU', 'GPU'],
help='The device type.')
parser.add_argument(
'--gpus',
type=int,
default=1,
help='If gpus > 1, will use ParallelExecutor to run, else use Executor.')
# this option is available only for vgg and resnet.
parser.add_argument(
'--cpus',
type=int,
default=1,
help='If cpus > 1, will use ParallelDo to run, else use Executor.')
parser.add_argument(
'--data_set',
type=str,
default='flowers',
choices=['cifar10', 'flowers'],
help='Optional dataset for benchmark.')
parser.add_argument(
'--infer_only', action='store_true', help='If set, run forward only.')
parser.add_argument(
'--use_cprof', action='store_true', help='If set, use cProfile.')
parser.add_argument(
'--use_nvprof',
action='store_true',
help='If set, use nvprof for CUDA.')
parser.add_argument(
'--no_test',
action='store_true',
help='If set, do not test the testset during training.')
parser.add_argument(
'--memory_optimize',
action='store_true',
help='If set, optimize runtime memory before start.')
parser.add_argument(
'--use_fake_data',
action='store_true',
help='If set ommit the actual read data operators.')
parser.add_argument(
'--profile', action='store_true', help='If set, profile a few steps.')
parser.add_argument(
'--update_method',
type=str,
default='local',
choices=['local', 'pserver', 'nccl2'],
help='Choose parameter update method, can be local, pserver, nccl2.')
parser.add_argument(
'--no_split_var',
action='store_true',
default=False,
help='Whether split variables into blocks when update_method is pserver')
parser.add_argument(
'--async_mode',
action='store_true',
default=False,
help='Whether start pserver in async mode to support ASGD')
parser.add_argument(
'--use_reader_op',
action='store_true',
help='Whether to use reader op, and must specify the data path if set this to true.'
)
parser.add_argument(
'--data_path',
type=str,
default="",
help='Directory that contains all the training recordio files.')
parser.add_argument(
'--use_inference_transpiler',
action='store_true',
help='If set, use inference transpiler to optimize the program.')
parser.add_argument(
'--no_random',
action='store_true',
help='If set, keep the random seed and do not shuffle the data.')
args = parser.parse_args()
return args

File diff suppressed because it is too large Load Diff

@ -17,6 +17,7 @@ import copy
import argparse
import random
import os
import copy
from kube_templates import pserver, trainer, envs
@ -108,10 +109,9 @@ def gen_job():
tn_container["ports"][0]["containerPort"] = spreadport
envs.append({"name": "PADDLE_JOB_NAME", "value": args.jobname})
envs.append({"name": "TRAINERS", "value": str(args.trainers)})
envs.append({"name": "PSERVERS", "value": str(args.pservers)})
envs.append({"name": "PADDLE_TRAINERS", "value": str(args.trainers)})
envs.append({"name": "PADDLE_PSERVERS", "value": str(args.pservers)})
envs.append({"name": "ENTRY", "value": args.entry})
envs.append({"name": "PADDLE_INIT_PORT", "value": str(args.port)})
envs.append({"name": "PADDLE_PSERVER_PORT", "value": str(args.port)})
# NOTE: these directories below are cluster specific, please modify
# this settings before you run on your own cluster.
@ -166,17 +166,23 @@ def gen_job():
tn["spec"]["template"]["spec"]["volumes"] = volumes
tn_container["volumeMounts"] = volumeMounts
ps_container["env"] = envs
ps_container["env"].append({"name": "TRAINING_ROLE", "value": "PSERVER"})
ps_container["env"] = copy.deepcopy(envs)
ps_container["env"].append({
"name": "PADDLE_TRAINING_ROLE",
"value": "PSERVER"
})
tn_container["env"] = envs
if args.disttype == "pserver":
tn_container["env"].append({
"name": "TRAINING_ROLE",
"name": "PADDLE_TRAINING_ROLE",
"value": "TRAINER"
})
elif args.disttype == "nccl2" or args.disttype == "local":
# NCCL2 have no training role, set to plain WORKER
tn_container["env"].append({"name": "TRAINING_ROLE", "value": "WORKER"})
tn_container["env"].append({
"name": "PADDLE_TRAINING_ROLE",
"value": "WORKER"
})
os.mkdir(args.jobname)
if args.disttype == "pserver":

@ -173,21 +173,6 @@ def seq_to_seq_net(embedding_dim, encoder_size, decoder_size, source_dict_dim,
return avg_cost, feeding_list
def to_lodtensor(data, place):
seq_lens = [len(seq) for seq in data]
cur_len = 0
lod = [cur_len]
for l in seq_lens:
cur_len += l
lod.append(cur_len)
flattened_data = np.concatenate(data, axis=0).astype("int64")
flattened_data = flattened_data.reshape([len(flattened_data), 1])
lod_t = core.LoDTensor()
lod_t.set(flattened_data, place)
lod_t.set_lod([lod])
return lod_t, lod[-1]
def lodtensor_to_ndarray(lod_tensor):
dims = lod_tensor.get_dims()
ndarray = np.zeros(shape=dims).astype('float32')
@ -197,6 +182,8 @@ def lodtensor_to_ndarray(lod_tensor):
def get_model(args):
if args.use_reader_op:
raise Exception("machine_translation do not support reader op for now.")
embedding_dim = 512
encoder_size = 512
decoder_size = 512
@ -221,7 +208,7 @@ def get_model(args):
train_batch_generator = paddle.batch(
paddle.reader.shuffle(
paddle.dataset.wmt14.train(dict_size), buf_size=1000),
batch_size=args.batch_size)
batch_size=args.batch_size * args.gpus)
test_batch_generator = paddle.batch(
paddle.reader.shuffle(

@ -20,6 +20,7 @@ import numpy as np
import argparse
import time
import cProfile
import os
import paddle
import paddle.fluid as fluid
@ -65,19 +66,49 @@ def cnn_model(data):
def get_model(args):
# Input data
images = fluid.layers.data(name='pixel', shape=[1, 28, 28], dtype=DTYPE)
label = fluid.layers.data(name='label', shape=[1], dtype='int64')
# Train program
predict = cnn_model(images)
cost = fluid.layers.cross_entropy(input=predict, label=label)
avg_cost = fluid.layers.mean(x=cost)
# Evaluator
batch_size_tensor = fluid.layers.create_tensor(dtype='int64')
batch_acc = fluid.layers.accuracy(
input=predict, label=label, total=batch_size_tensor)
if args.use_reader_op:
filelist = [
os.path.join(args.data_path, f) for f in os.listdir(args.data_path)
]
data_file = fluid.layers.open_files(
filenames=filelist,
shapes=[[-1, 1, 28, 28], (-1, 1)],
lod_levels=[0, 0],
dtypes=["float32", "int64"],
thread_num=args.gpus,
pass_num=args.pass_num)
data_file = fluid.layers.double_buffer(
fluid.layers.batch(
data_file, batch_size=args.batch_size))
images, label = fluid.layers.read_file(data_file)
else:
images = fluid.layers.data(name='pixel', shape=[1, 28, 28], dtype=DTYPE)
label = fluid.layers.data(name='label', shape=[1], dtype='int64')
if args.device == 'CPU' and args.cpus > 1:
places = fluid.layers.get_places(args.cpus)
pd = fluid.layers.ParallelDo(places)
with pd.do():
predict = cnn_model(pd.read_input(images))
label = pd.read_input(label)
cost = fluid.layers.cross_entropy(input=predict, label=label)
avg_cost = fluid.layers.mean(x=cost)
batch_acc = fluid.layers.accuracy(input=predict, label=label)
pd.write_output(avg_cost)
pd.write_output(batch_acc)
avg_cost, batch_acc = pd()
avg_cost = fluid.layers.mean(avg_cost)
batch_acc = fluid.layers.mean(batch_acc)
else:
# Train program
predict = cnn_model(images)
cost = fluid.layers.cross_entropy(input=predict, label=label)
avg_cost = fluid.layers.mean(x=cost)
# Evaluator
batch_acc = fluid.layers.accuracy(input=predict, label=label)
# inference program
inference_program = fluid.default_main_program().clone()
@ -88,7 +119,7 @@ def get_model(args):
# Reader
train_reader = paddle.batch(
paddle.dataset.mnist.train(), batch_size=args.batch_size)
paddle.dataset.mnist.train(), batch_size=args.batch_size * args.gpus)
test_reader = paddle.batch(
paddle.dataset.mnist.test(), batch_size=args.batch_size)
return avg_cost, inference_program, opt, train_reader, test_reader, batch_acc

@ -19,6 +19,7 @@ from __future__ import print_function
import functools
import numpy as np
import time
import os
import cProfile, pstats, StringIO
@ -26,6 +27,7 @@ import paddle
import paddle.fluid as fluid
import paddle.fluid.core as core
import paddle.fluid.profiler as profiler
from recordio_converter import imagenet_train, imagenet_test
def conv_bn_layer(input, ch_out, filter_size, stride, padding, act='relu'):
@ -122,40 +124,85 @@ def get_model(args):
else:
dshape = [32, 32, 3]
model = resnet_cifar10
else:
train_reader = paddle.dataset.cifar.train10()
test_reader = paddle.dataset.cifar.test10()
elif args.data_set == "flowers":
class_dim = 102
if args.data_format == 'NCHW':
dshape = [3, 224, 224]
else:
dshape = [224, 224, 3]
model = resnet_imagenet
input = fluid.layers.data(name='data', shape=dshape, dtype='float32')
label = fluid.layers.data(name='label', shape=[1], dtype='int64')
predict = model(input, class_dim)
cost = fluid.layers.cross_entropy(input=predict, label=label)
avg_cost = fluid.layers.mean(x=cost)
batch_size_tensor = fluid.layers.create_tensor(dtype='int64')
batch_acc = fluid.layers.accuracy(
input=predict, label=label, total=batch_size_tensor)
train_reader = paddle.dataset.flowers.train()
test_reader = paddle.dataset.flowers.test()
elif args.data_set == "imagenet":
class_dim = 1000
if args.data_format == 'NCHW':
dshape = [3, 224, 224]
else:
dshape = [224, 224, 3]
model = resnet_imagenet
if not args.data_path:
raise Exception(
"Must specify --data_path when training with imagenet")
train_reader = imagenet_train(args.data_path)
test_reader = imagenet_test(args.data_path)
if args.use_reader_op:
filelist = [
os.path.join(args.data_path, f) for f in os.listdir(args.data_path)
]
data_file = fluid.layers.open_files(
filenames=filelist,
shapes=[[-1] + dshape, (-1, 1)],
lod_levels=[0, 0],
dtypes=["float32", "int64"],
thread_num=args.gpus,
pass_num=args.pass_num)
data_file = fluid.layers.double_buffer(
fluid.layers.batch(
data_file, batch_size=args.batch_size))
input, label = fluid.layers.read_file(data_file)
else:
input = fluid.layers.data(name='data', shape=dshape, dtype='float32')
label = fluid.layers.data(name='label', shape=[1], dtype='int64')
if args.device == 'CPU' and args.cpus > 1:
places = fluid.layers.get_places(args.cpus)
pd = fluid.layers.ParallelDo(places)
with pd.do():
predict = model(pd.read_input(input), class_dim)
label = pd.read_input(label)
cost = fluid.layers.cross_entropy(input=predict, label=label)
avg_cost = fluid.layers.mean(x=cost)
batch_acc = fluid.layers.accuracy(input=predict, label=label)
pd.write_output(avg_cost)
pd.write_output(batch_acc)
avg_cost, batch_acc = pd()
avg_cost = fluid.layers.mean(avg_cost)
batch_acc = fluid.layers.mean(batch_acc)
else:
predict = model(input, class_dim)
cost = fluid.layers.cross_entropy(input=predict, label=label)
avg_cost = fluid.layers.mean(x=cost)
batch_acc = fluid.layers.accuracy(input=predict, label=label)
inference_program = fluid.default_main_program().clone()
with fluid.program_guard(inference_program):
inference_program = fluid.io.get_inference_program(
target_vars=[batch_acc, batch_size_tensor])
target_vars=[batch_acc])
optimizer = fluid.optimizer.Momentum(learning_rate=0.01, momentum=0.9)
train_reader = paddle.batch(
paddle.reader.shuffle(
paddle.dataset.cifar.train10()
if args.data_set == 'cifar10' else paddle.dataset.flowers.train(),
buf_size=5120),
batch_size=args.batch_size)
test_reader = paddle.batch(
paddle.dataset.cifar.test10()
if args.data_set == 'cifar10' else paddle.dataset.flowers.test(),
batch_size=args.batch_size)
return avg_cost, inference_program, optimizer, train_reader, test_reader, batch_acc
batched_train_reader = paddle.batch(
train_reader if args.no_random else paddle.reader.shuffle(
train_reader, buf_size=5120),
batch_size=args.batch_size * args.gpus,
drop_last=True)
batched_test_reader = paddle.batch(
test_reader, batch_size=args.batch_size, drop_last=True)
return avg_cost, inference_program, optimizer, batched_train_reader,\
batched_test_reader, batch_acc

@ -44,6 +44,9 @@ def crop_sentence(reader, crop_size):
def get_model(args):
if args.use_reader_op:
raise Exception(
"stacked_dynamic_lstm do not support reader op for now.")
lstm_size = 512
emb_dim = 512
crop_size = 1500
@ -115,25 +118,10 @@ def get_model(args):
train_reader = batch(
paddle.reader.shuffle(
crop_sentence(imdb.train(word_dict), crop_size), buf_size=25000),
batch_size=args.batch_size)
batch_size=args.batch_size * args.gpus)
test_reader = batch(
paddle.reader.shuffle(
crop_sentence(imdb.test(word_dict), crop_size), buf_size=25000),
batch_size=args.batch_size)
return loss, inference_program, adam, train_reader, test_reader, batch_acc
def to_lodtensor(data, place):
seq_lens = [len(seq) for seq in data]
cur_len = 0
lod = [cur_len]
for l in seq_lens:
cur_len += l
lod.append(cur_len)
flattened_data = numpy.concatenate(data, axis=0).astype("int64")
flattened_data = flattened_data.reshape([len(flattened_data), 1])
res = fluid.LoDTensor()
res.set(flattened_data, place)
res.set_lod([lod])
return res

@ -22,6 +22,7 @@ import paddle.fluid as fluid
import paddle.fluid.core as core
import argparse
import functools
import os
def vgg16_bn_drop(input):
@ -65,9 +66,25 @@ def get_model(args):
else:
data_shape = [224, 224, 3]
# Input data
images = fluid.layers.data(name='pixel', shape=data_shape, dtype='float32')
label = fluid.layers.data(name='label', shape=[1], dtype='int64')
if args.use_reader_op:
filelist = [
os.path.join(args.data_path, f) for f in os.listdir(args.data_path)
]
data_file = fluid.layers.open_files(
filenames=filelist,
shapes=[[-1] + data_shape, (-1, 1)],
lod_levels=[0, 0],
dtypes=["float32", "int64"],
thread_num=args.gpus,
pass_num=args.pass_num)
data_file = fluid.layers.double_buffer(
fluid.layers.batch(
data_file, batch_size=args.batch_size))
images, label = fluid.layers.read_file(data_file)
else:
images = fluid.layers.data(
name='data', shape=data_shape, dtype='float32')
label = fluid.layers.data(name='label', shape=[1], dtype='int64')
# Train program
net = vgg16_bn_drop(images)
@ -95,7 +112,7 @@ def get_model(args):
paddle.dataset.cifar.train10()
if args.data_set == 'cifar10' else paddle.dataset.flowers.train(),
buf_size=5120),
batch_size=args.batch_size)
batch_size=args.batch_size * args.gpus)
test_reader = paddle.batch(
paddle.dataset.cifar.test10()
if args.data_set == 'cifar10' else paddle.dataset.flowers.test(),

@ -0,0 +1,164 @@
# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import os
import random
import paddle
import paddle.fluid as fluid
import paddle.fluid.core as core
from paddle.dataset import mnist, cifar, flowers, image
def convert_2_recordio(py_reader, outfilepath, batch_size, shape_data,
shape_label):
num_batches = 0
with fluid.program_guard(fluid.Program(), fluid.Program()):
reader = paddle.batch(py_reader(), batch_size=batch_size)
feeder = fluid.DataFeeder(
feed_list=[ # order is image and label
fluid.layers.data(
name='image', shape=shape_data),
fluid.layers.data(
name='label', shape=shape_label, dtype='int64'),
],
place=fluid.CPUPlace())
num_batches = fluid.recordio_writer.convert_reader_to_recordio_file(
outfilepath, reader, feeder)
return num_batches
def prepare_mnist(outpath, batch_size):
outfilepath = os.path.join(outpath, "mnist.recordio")
convert_2_recordio(mnist.train, outfilepath, batch_size, [784], [1])
def prepare_cifar10(outpath, batch_size):
outfilepath = os.path.join(outpath, "cifar.recordio")
convert_2_recordio(cifar.train10, outfilepath, batch_size, [3, 32, 32], [1])
def prepare_flowers(outpath, batch_size):
outfilepath = os.path.join(outpath, "flowers.recordio")
convert_2_recordio(flowers.train, outfilepath, batch_size, [3, 224, 224],
[1])
def default_mapper(sample):
img, label = sample
img = image.simple_transform(
img, 256, 224, True, mean=[103.94, 116.78, 123.68])
return img.flatten().astype('float32'), label
def imagenet_train(data_dir):
contents = os.listdir(data_dir)
if set(contents) != set(
["train", "train.txt", "val", "val_set", "val.txt", "unzip.sh"]):
raise Exception("Imagenet data contents error!")
img2label = dict()
imgfilelist = []
with open(os.path.join(data_dir, "train.txt")) as fn:
while 1:
l = fn.readline()
if not l:
break
img, lbl = l[:-1].split(" ")
img2label[img] = int(lbl)
imgfilelist.append(img)
# shuffle all, this is slow
random.shuffle(imgfilelist)
def train_reader():
for idx, imgfile in enumerate(imgfilelist):
data = image.load_image(
os.path.join(data_dir, "train", imgfile.lower()))
label = [img2label[imgfile], ]
yield [data, label]
return paddle.reader.map_readers(default_mapper, train_reader)
def imagenet_test(data_dir):
contents = os.listdir(data_dir)
if set(contents) != set(
["train", "train.txt", "val", "val_set", "val.txt", "unzip.sh"]):
raise Exception("Imagenet data contents error!")
img2label = dict()
imgfilelist = []
with open(os.path.join(data_dir, "val.txt")) as fn:
while 1:
l = fn.readline()
if not l:
break
img, lbl = l[:-1].split(" ")
img2label[img] = int(lbl)
imgfilelist.append(img)
def test_reader():
for idx, imgfile in enumerate(imgfilelist):
base_path = os.path.join(data_dir, "val", imgfile.split(".")[0])
image_path = ".".join([base_path, "jpeg"])
data = image.load_image(image_path)
label = [img2label[imgfile], ]
yield [data, label]
return paddle.reader.map_readers(default_mapper, test_reader)
# FIXME(wuyi): delete this when https://github.com/PaddlePaddle/Paddle/pull/11066 is merged
def convert_reader_to_recordio_files(
filename,
batch_per_file,
reader_creator,
feeder,
compressor=core.RecordIOWriter.Compressor.Snappy,
max_num_records=1000,
feed_order=None):
if feed_order is None:
feed_order = feeder.feed_names
f_name, f_ext = os.path.splitext(filename)
assert (f_ext == ".recordio")
lines = []
f_idx = 0
counter = 0
for idx, batch in enumerate(reader_creator()):
lines.append(batch)
if idx >= batch_per_file and idx % batch_per_file == 0:
filename = "%s-%05d%s" % (f_name, f_idx, f_ext)
with fluid.recordio_writer.create_recordio_writer(
filename, compressor, max_num_records) as writer:
for l in lines:
res = feeder.feed(l)
for each in feed_order:
writer.append_tensor(res[each])
writer.complete_append_tensor()
counter += 1
lines = []
f_idx += 1
print("written file: ", filename)
return counter
def prepare_imagenet(inpath, outpath, batch_size):
r = paddle.batch(imagenet_train(inpath), batch_size=batch_size)
feeder = fluid.DataFeeder(
feed_list=[
fluid.layers.data(
name="image", shape=[3, 224, 224]), fluid.layers.data(
name="label", shape=[1], dtype='int64')
],
place=fluid.CPUPlace())
outpath = os.path.join(outpath, "imagenet.recordio")
convert_reader_to_recordio_files(outpath, 10000, r, feeder)

@ -2,6 +2,7 @@
# This script benchmarking the PaddlePaddle Fluid on
# single thread single GPU.
mkdir -p logs
#export FLAGS_fraction_of_gpu_memory_to_use=0.0
export CUDNN_PATH=/paddle/cudnn_v5
@ -35,71 +36,74 @@ nohup stdbuf -oL nvidia-smi \
--format=csv \
--filename=mem.log \
-l 1 &
# mnist
# mnist gpu mnist 128
FLAGS_benchmark=true stdbuf -oL python fluid/mnist.py \
FLAGS_benchmark=true stdbuf -oL python fluid_benchmark.py \
--model=mnist \
--device=GPU \
--batch_size=128 \
--skip_batch_num=5 \
--iterations=500 \
2>&1 | tee -a mnist_gpu_128.log
2>&1 | tee -a logs/mnist_gpu_128.log
# vgg16
# gpu cifar10 128
FLAGS_benchmark=true stdbuf -oL python fluid/vgg16.py \
FLAGS_benchmark=true stdbuf -oL python fluid_benchmark.py \
--model=vgg16 \
--device=GPU \
--batch_size=128 \
--skip_batch_num=5 \
--iterations=30 \
2>&1 | tee -a vgg16_gpu_128.log
2>&1 | tee -a logs/vgg16_gpu_128.log
# flowers gpu 128
FLAGS_benchmark=true stdbuf -oL python fluid/vgg16.py \
FLAGS_benchmark=true stdbuf -oL python fluid_benchmark.py \
--model=vgg16 \
--device=GPU \
--batch_size=32 \
--data_set=flowers \
--skip_batch_num=5 \
--iterations=30 \
2>&1 | tee -a vgg16_gpu_flowers_32.log
2>&1 | tee -a logs/vgg16_gpu_flowers_32.log
# resnet50
# resnet50 gpu cifar10 128
FLAGS_benchmark=true stdbuf -oL python fluid/resnet50.py \
FLAGS_benchmark=true stdbuf -oL python fluid_benchmark.py \
--model=resnet \
--device=GPU \
--batch_size=128 \
--data_set=cifar10 \
--model=resnet_cifar10 \
--skip_batch_num=5 \
--iterations=30 \
2>&1 | tee -a resnet50_gpu_128.log
2>&1 | tee -a logs/resnet50_gpu_128.log
# resnet50 gpu flowers 64
FLAGS_benchmark=true stdbuf -oL python fluid/resnet50.py \
FLAGS_benchmark=true stdbuf -oL python fluid_benchmark.py \
--model=resnet \
--device=GPU \
--batch_size=64 \
--data_set=flowers \
--model=resnet_imagenet \
--skip_batch_num=5 \
--iterations=30 \
2>&1 | tee -a resnet50_gpu_flowers_64.log
2>&1 | tee -a logs/resnet50_gpu_flowers_64.log
# lstm
# lstm gpu imdb 32 # tensorflow only support batch=32
FLAGS_benchmark=true stdbuf -oL python fluid/stacked_dynamic_lstm.py \
FLAGS_benchmark=true stdbuf -oL python fluid_benchmark.py \
--model=stacked_dynamic_lstm \
--device=GPU \
--batch_size=32 \
--skip_batch_num=5 \
--iterations=30 \
--hidden_dim=512 \
--emb_dim=512 \
--crop_size=1500 \
2>&1 | tee -a lstm_gpu_32.log
2>&1 | tee -a logs/lstm_gpu_32.log
# seq2seq
# seq2seq gpu wmb 128
FLAGS_benchmark=true stdbuf -oL python fluid/machine_translation.py \
FLAGS_benchmark=true stdbuf -oL python fluid_benchmark.py \
--model=machine_translation \
--device=GPU \
--batch_size=128 \
--skip_batch_num=5 \
--iterations=30 \
2>&1 | tee -a lstm_gpu_128.log
2>&1 | tee -a logs/lstm_gpu_128.log

@ -0,0 +1,9 @@
#!/bin/bash
PADDLE_TRAINING_ROLE=PSERVER PADDLE_PSERVER_PORT=7164 PADDLE_PSERVER_IPS=127.0.0.1 PADDLE_TRAINERS=2 PADDLE_CURRENT_IP=127.0.0.1 PADDLE_TRAINER_ID=0 python fluid_benchmark.py --model resnet --device CPU --update_method pserver --iterations=10000 &
sleep 15
CUDA_VISIBLE_DEVICES=0,1 PADDLE_TRAINING_ROLE=TRAINER PADDLE_PSERVER_PORT=7164 PADDLE_PSERVER_IPS=127.0.0.1 PADDLE_TRAINERS=2 PADDLE_CURRENT_IP=127.0.0.1 PADDLE_TRAINER_ID=0 python fluid_benchmark.py --model resnet --device GPU --update_method pserver --iterations=10000 --gpus 2 &
CUDA_VISIBLE_DEVICES=2,3 PADDLE_TRAINING_ROLE=TRAINER PADDLE_PSERVER_PORT=7164 PADDLE_PSERVER_IPS=127.0.0.1 PADDLE_TRAINERS=2 PADDLE_CURRENT_IP=127.0.0.1 PADDLE_TRAINER_ID=1 python fluid_benchmark.py --model resnet --device GPU --update_method pserver --iterations=10000 --gpus 2 &

@ -1,3 +1,5 @@
#!/bin/bash
set -e
function train() {

@ -1,3 +1,5 @@
#!/bin/bash
set -e
function clock_to_seconds() {

@ -1,3 +1,5 @@
#!/bin/bash
set -e
function train() {

@ -1,3 +1,5 @@
#!/bin/bash
set -e
function clock_to_seconds() {

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