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Paddle/python/paddle/fluid/tests/unittests/op_test.py

552 lines
21 KiB

# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import unittest
import numpy as np
import random
import itertools
import paddle.fluid.core as core
import collections
from paddle.fluid.backward import append_backward
from paddle.fluid.op import Operator
from paddle.fluid.executor import Executor
from paddle.fluid.framework import Program, OpProtoHolder
def randomize_probability(batch_size, class_num, dtype='float32'):
prob = np.random.uniform(
0.1, 1.0, size=(batch_size, class_num)).astype(dtype)
prob_sum = prob.sum(axis=1)
for i in xrange(len(prob)):
prob[i] /= prob_sum[i]
return prob
def create_op(scope, op_type, inputs, outputs, attrs):
kwargs = dict()
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def __create_var__(name, var_name):
scope.var(var_name).get_tensor()
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kwargs[name].append(var_name)
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for in_name, in_dup in Operator.get_op_inputs(op_type):
if in_name in inputs:
kwargs[in_name] = []
if in_dup:
sub_in = inputs[in_name]
for item in sub_in:
sub_in_name, _ = item[0], item[1]
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__create_var__(in_name, sub_in_name)
else:
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__create_var__(in_name, in_name)
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for out_name, out_dup in Operator.get_op_outputs(op_type):
if out_name in outputs:
kwargs[out_name] = []
if out_dup:
sub_out = outputs[out_name]
for item in sub_out:
sub_out_name, _ = item[0], item[1]
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__create_var__(out_name, sub_out_name)
else:
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__create_var__(out_name, out_name)
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for attr_name in Operator.get_op_attr_names(op_type):
if attr_name in attrs:
kwargs[attr_name] = attrs[attr_name]
return Operator(op_type, **kwargs)
def set_input(scope, op, inputs, place):
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def __set_input__(var_name, var):
if isinstance(var, tuple) or isinstance(var, np.ndarray):
tensor = scope.find_var(var_name).get_tensor()
if isinstance(var, tuple):
tensor.set_lod(var[1])
var = var[0]
tensor.set_dims(var.shape)
tensor.set(var, place)
elif isinstance(var, float):
scope.find_var(var_name).set_float(var)
elif isinstance(var, int):
scope.find_var(var_name).set_int(var)
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for in_name, in_dup in Operator.get_op_inputs(op.type()):
if in_name in inputs:
if in_dup:
sub_in = inputs[in_name]
for item in sub_in:
sub_in_name, sub_in_val = item[0], item[1]
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__set_input__(sub_in_name, sub_in_val)
else:
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__set_input__(in_name, inputs[in_name])
def get_numeric_gradient(place,
scope,
op,
inputs,
input_to_check,
output_names,
delta=0.005,
in_place=False):
# FIXME: change this method by compile time concepts
set_input(scope, op, inputs, place)
def product(dim):
return reduce(lambda a, b: a * b, dim, 1)
def get_output():
sum = []
for output_name in output_names:
op.run(scope, place)
sum.append(
np.array(scope.find_var(output_name).get_tensor()).mean())
return np.array(sum).mean()
tensor_to_check = scope.find_var(input_to_check).get_tensor()
tensor_size = product(tensor_to_check.get_dims())
tensor_to_check_dtype = tensor_to_check.dtype()
[WIP] Move DataType enum inside VarType (#8447) * Move Pod Types from DataType enum to Type enum * Fixed data_type.h * Fix type in TensorDesc * Add comment to framework.proto * Fixed type in data_type.h * Updated format of type in data_type.h * Fix var_desc.h * Fix op_kernel_type.h * Fixed data_type_transform_test.cc * Fix operator.h * Fixed data_type_transform.cc * Fixed op_kernel_type_test.cc * Fix operator.cc * Fixed data_layout_transform_test.cc * Fix var_desc.cc * Fixed assign_value_op.cc * Fixed assign_value_op.h * fixed protobuf.cc * Fix data_layout_transform_test.cc and op_kernel_type_test.cc * Fixed rnn_memory_helper_op.cc * Fix progrma_desc_test.cc * Fixed fill_constant_batch_size_like_op.cc * Fix operator_test.cc * Fixed fill_constant_op.cc * Fixed gaussian_random_op.cc * Fixed uniform_random_op.cc * Fixed edit_distance_op.cc * Fixed fill_constant_batch_size_like_op.cc * Fixed rnn_memory_helper_op.cc * Fixed chunk_eval_op.cc * Fixed assign_value_op.cc * Fixed assign_value_op.h * Fixed cast_op.h * Fixed cast_op.h * Fix fill constant op * Fixed clang for assign_value_op.cc * Fix one_hot_op.h * Fix one_hot_op.cc * Fix fill_op.cc * Fixed sum_op.cc * Fixed sum_op clang * Fix uniform_random_op.cc * Fix gaussian_random_op.cc * Fix backward.cc * Fix protobuf.cc * Fixed prune_test.cc * Fixed op_registry_test.cc * Fix data_device_transform_test.cu * Fix travis error * Fixed one_hot_op.cu * Fixed op_registry_test.cc * Fixed nccl_op.cc * Fixing python tests * Revert "Fixing python tests" This reverts commit fccaa4c5818ed9f379ea1ce4315066cc78076c64. * Fixing Pybind to remove data type * Fixing tensor.py * Updated the new files: * Resolve error in merge conflict of fill_constant_batch_size_like_op.cc
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if tensor_to_check_dtype == core.VarDesc.VarType.FP32:
tensor_to_check_dtype = np.float32
[WIP] Move DataType enum inside VarType (#8447) * Move Pod Types from DataType enum to Type enum * Fixed data_type.h * Fix type in TensorDesc * Add comment to framework.proto * Fixed type in data_type.h * Updated format of type in data_type.h * Fix var_desc.h * Fix op_kernel_type.h * Fixed data_type_transform_test.cc * Fix operator.h * Fixed data_type_transform.cc * Fixed op_kernel_type_test.cc * Fix operator.cc * Fixed data_layout_transform_test.cc * Fix var_desc.cc * Fixed assign_value_op.cc * Fixed assign_value_op.h * fixed protobuf.cc * Fix data_layout_transform_test.cc and op_kernel_type_test.cc * Fixed rnn_memory_helper_op.cc * Fix progrma_desc_test.cc * Fixed fill_constant_batch_size_like_op.cc * Fix operator_test.cc * Fixed fill_constant_op.cc * Fixed gaussian_random_op.cc * Fixed uniform_random_op.cc * Fixed edit_distance_op.cc * Fixed fill_constant_batch_size_like_op.cc * Fixed rnn_memory_helper_op.cc * Fixed chunk_eval_op.cc * Fixed assign_value_op.cc * Fixed assign_value_op.h * Fixed cast_op.h * Fixed cast_op.h * Fix fill constant op * Fixed clang for assign_value_op.cc * Fix one_hot_op.h * Fix one_hot_op.cc * Fix fill_op.cc * Fixed sum_op.cc * Fixed sum_op clang * Fix uniform_random_op.cc * Fix gaussian_random_op.cc * Fix backward.cc * Fix protobuf.cc * Fixed prune_test.cc * Fixed op_registry_test.cc * Fix data_device_transform_test.cu * Fix travis error * Fixed one_hot_op.cu * Fixed op_registry_test.cc * Fixed nccl_op.cc * Fixing python tests * Revert "Fixing python tests" This reverts commit fccaa4c5818ed9f379ea1ce4315066cc78076c64. * Fixing Pybind to remove data type * Fixing tensor.py * Updated the new files: * Resolve error in merge conflict of fill_constant_batch_size_like_op.cc
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elif tensor_to_check_dtype == core.VarDesc.VarType.FP64:
tensor_to_check_dtype = np.float64
else:
raise ValueError("Not supported data type " + str(
tensor_to_check_dtype))
gradient_flat = np.zeros(shape=(tensor_size, ), dtype=tensor_to_check_dtype)
def __get_elem__(tensor, i):
if tensor_to_check_dtype == np.float32:
return tensor.get_float_element(i)
else:
return tensor.get_double_element(i)
def __set_elem__(tensor, i, e):
if tensor_to_check_dtype == np.float32:
tensor.set_float_element(i, e)
else:
tensor.set_double_element(i, e)
# we only compute gradient of one element each time.
# we use a for loop to compute the gradient of every element.
for i in xrange(tensor_size):
if in_place:
set_input(scope, op, inputs, place)
# get one input element throw it's index i.
origin = __get_elem__(tensor_to_check, i)
# add delta to it, run op and then get the sum of the result tensor.
x_pos = origin + delta
__set_elem__(tensor_to_check, i, x_pos)
y_pos = get_output()
if in_place:
set_input(scope, op, inputs, place)
x_neg = origin - delta
__set_elem__(tensor_to_check, i, x_neg)
y_neg = get_output()
__set_elem__(tensor_to_check, i, origin)
gradient_flat[i] = (y_pos - y_neg) / delta / 2
return gradient_flat.reshape(tensor_to_check.get_dims())
def append_input_output(block, op_proto, np_list, is_input):
'''Insert VarDesc and generate Python variable instance'''
proto_list = op_proto.inputs if is_input else op_proto.outputs
def create_var(block, name, np_list, var_proto):
if name not in np_list:
assert var_proto.intermediate, "{} not found".format(name)
shape = None
lod_level = None
else:
np_value = np_list[name]
if isinstance(np_value, tuple):
shape = list(np_value[0].shape)
lod_level = len(np_value[1])
else:
shape = list(np_value.shape)
lod_level = 0
return block.create_var(
dtype="float32", shape=shape, lod_level=lod_level, name=name)
var_dict = {}
for var_proto in proto_list:
var_name = str(var_proto.name)
if is_input:
if (var_name not in np_list) and var_proto.dispensable:
continue
assert (var_name in np_list) or (var_proto.dispensable), \
"Missing {} as input".format(var_name)
if var_proto.duplicable:
assert isinstance(np_list[var_name], list), \
"Duplicable {} should be set as list".format(var_name)
var_list = []
for (name, np_value) in np_list[var_name]:
var_list.append(
create_var(block, name, {name: np_value}, var_proto))
var_dict[var_name] = var_list
else:
var_dict[var_name] = create_var(block, var_name, np_list, var_proto)
return var_dict
class OpTest(unittest.TestCase):
@classmethod
def setUpClass(cls):
'''Fix random seeds to remove randomness from tests'''
cls._np_rand_state = np.random.get_state()
cls._py_rand_state = random.getstate()
np.random.seed(123)
random.seed(124)
@classmethod
def tearDownClass(cls):
'''Restore random seeds'''
np.random.set_state(cls._np_rand_state)
random.setstate(cls._py_rand_state)
def feed_var(self, input_vars, place):
feed_map = {}
for var_name in input_vars:
if isinstance(input_vars[var_name], list):
for name, np_value in self.inputs[var_name]:
tensor = core.LoDTensor()
if isinstance(np_value, tuple):
tensor.set(np_value[0], place)
tensor.set_lod(np_value[1])
else:
tensor.set(np_value, place)
feed_map[name] = tensor
else:
tensor = core.LoDTensor()
if isinstance(self.inputs[var_name], tuple):
tensor.set(self.inputs[var_name][0], place)
tensor.set_lod(self.inputs[var_name][1])
else:
tensor.set(self.inputs[var_name], place)
feed_map[var_name] = tensor
return feed_map
def calc_output(self, place):
outs, _ = self._calc_output(place)
return outs
def _calc_output(self, place):
op_proto = OpProtoHolder.instance().get_op_proto(self.op_type)
program = Program()
block = program.global_block()
inputs = append_input_output(block, op_proto, self.inputs, True)
outputs = append_input_output(block, op_proto, self.outputs, False)
op = block.append_op(
type=self.op_type,
inputs=inputs,
outputs=outputs,
attrs=self.attrs if hasattr(self, "attrs") else dict())
# infer variable type and infer shape in compile-time
op.desc.infer_var_type(block.desc)
op.desc.infer_shape(block.desc)
fetch_list = []
for var_name, var in outputs.iteritems():
if var_name in self.outputs:
if isinstance(var, list):
for v in var:
fetch_list.append(v)
else:
fetch_list.append(var)
feed_map = self.feed_var(inputs, place)
exe = Executor(place)
outs = exe.run(program,
feed=feed_map,
fetch_list=fetch_list,
return_numpy=False)
return outs, fetch_list
def check_output_with_place(self, place, atol):
outs, fetch_list = self._calc_output(place)
for out_name, out_dup in Operator.get_op_outputs(self.op_type):
if out_name not in self.outputs:
continue
def find_actual(target_name, fetch_list):
found = [
i for i, var in enumerate(fetch_list)
if var.name == target_name
]
self.assertTrue(
len(found) == 1, "Found {} {}".format(
len(found), target_name))
return found[0]
if out_dup:
sub_out = self.outputs[out_name]
if not isinstance(sub_out, list):
raise AssertionError("sub_out type %s is not list",
type(sub_out))
for item in sub_out:
sub_out_name, expect = item[0], item[1]
idx = find_actual(sub_out_name, fetch_list)
actual = outs[idx]
actual_t = np.array(actual)
expect_t = expect[0] \
if isinstance(expect, tuple) else expect
self.assertTrue(
np.allclose(
actual_t, expect_t, atol=atol),
"Output (" + sub_out_name + ") has diff at " +
str(place))
if isinstance(expect, tuple):
self.assertListEqual(
actual.lod(), expect[1], "Output (" + sub_out_name +
") has different lod at " + str(place))
else:
idx = find_actual(out_name, fetch_list)
actual = outs[idx]
actual_t = np.array(actual)
expect = self.outputs[out_name]
expect_t = expect[0] if isinstance(expect, tuple) else expect
self.assertTrue(
np.allclose(
actual_t, expect_t, atol=atol),
"Output (" + out_name + ") has diff at " + str(place) +
str(actual_t) + str(expect_t))
if isinstance(expect, tuple):
self.assertListEqual(actual.lod(), expect[1],
"Output (" + out_name +
") has different lod at " + str(place))
def check_output(self, atol=1e-5):
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places = [core.CPUPlace()]
if core.is_compiled_with_cuda() and core.op_support_gpu(self.op_type):
places.append(core.CUDAPlace(0))
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for place in places:
self.check_output_with_place(place, atol)
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def check_output_customized(self, checker):
places = [core.CPUPlace()]
if core.is_compiled_with_cuda() and core.op_support_gpu(self.op_type):
places.append(core.CUDAPlace(0))
for place in places:
outs = self.calc_output(place)
outs = [np.array(out) for out in outs]
checker(outs)
def __assert_is_close(self, numeric_grads, analytic_grads, names,
max_relative_error, msg_prefix):
for a, b, name in itertools.izip(numeric_grads, analytic_grads, names):
abs_a = np.abs(a)
abs_a[abs_a < 1e-3] = 1
diff_mat = np.abs(a - b) / abs_a
max_diff = np.max(diff_mat)
def err_msg():
offset = np.argmax(diff_mat > max_relative_error)
return ("%s Variable %s max gradient diff %f over limit %f, "
"the first error element is %d, %f, %f") % (
msg_prefix, name, max_diff, max_relative_error,
offset, a.flatten()[offset], b.flatten()[offset])
self.assertLessEqual(max_diff, max_relative_error, err_msg())
def check_grad(self,
inputs_to_check,
output_names,
no_grad_set=None,
numeric_grad_delta=0.005,
in_place=False,
max_relative_error=0.005,
user_defined_grads=None):
places = [core.CPUPlace()]
if core.is_compiled_with_cuda() and core.op_support_gpu(self.op_type):
places.append(core.CUDAPlace(0))
for place in places:
self.check_grad_with_place(place, inputs_to_check, output_names,
no_grad_set, numeric_grad_delta,
in_place, max_relative_error,
user_defined_grads)
def check_grad_with_place(self,
place,
inputs_to_check,
output_names,
no_grad_set=None,
numeric_grad_delta=0.005,
in_place=False,
max_relative_error=0.005,
user_defined_grads=None):
self.scope = core.Scope()
op_inputs = self.inputs if hasattr(self, "inputs") else dict()
op_outputs = self.outputs if hasattr(self, "outputs") else dict()
op_attrs = self.attrs if hasattr(self, "attrs") else dict()
self.op = create_op(self.scope, self.op_type, op_inputs, op_outputs,
op_attrs)
if no_grad_set is None:
no_grad_set = set()
if not type(output_names) is list:
output_names = [output_names]
numeric_grads = user_defined_grads or [
get_numeric_gradient(
place,
self.scope,
self.op,
self.inputs,
input_to_check,
output_names,
delta=numeric_grad_delta,
in_place=in_place) for input_to_check in inputs_to_check
]
analytic_grads = self._get_gradient(inputs_to_check, place,
output_names, no_grad_set)
self.__assert_is_close(numeric_grads, analytic_grads, inputs_to_check,
max_relative_error,
"Gradient Check On %s" % str(place))
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@staticmethod
def _create_var_descs_(block, var_dict):
# FIXME: Try unify with `append_input_output`
for param_name in var_dict:
var = var_dict[param_name]
if not isinstance(var, list) and not isinstance(var, tuple):
var = [(param_name, var, None)]
if not isinstance(var[0], list) and not isinstance(var[0], tuple):
var = [(param_name, var[0], var[1])]
for i, item in enumerate(var):
if not isinstance(item[0], basestring):
item = [[param_name] + list(item)]
if len(item) == 2:
if isinstance(item[1], tuple):
var[i] = [item[0], item[1][0], item[1][1]]
else:
# only set var name and value, set lod to None
var[i] = list(item) + [None]
var_descs = [(block.create_var(
name=name, shape=each.shape, dtype=each.dtype), each, lod)
for name, each, lod in var]
yield param_name, var_descs
@staticmethod
def _merge_list(iterable):
return reduce(lambda a, b: list(a) + list(b), iterable, [])
@staticmethod
def _numpy_to_lod_tensor(np_value, lod, place):
tensor = core.LoDTensor()
tensor.set(np_value, place)
if lod is not None:
tensor.set_lod(lod)
return tensor
def _get_gradient(self, input_to_check, place, output_names, no_grad_set):
prog = Program()
block = prog.global_block()
inputs_with_np = {
key: value
for (key, value) in OpTest._create_var_descs_(
block, getattr(self, 'inputs', {}))
}
outputs_with_np = {
key: val
for (key, val) in OpTest._create_var_descs_(
block, getattr(self, 'outputs', {}))
}
inputs = {
k: [item[0] for item in inputs_with_np[k]]
for k in inputs_with_np
}
outputs = {
k: [item[0] for item in outputs_with_np[k]]
for k in outputs_with_np
}
op = block.append_op(
type=self.op_type,
inputs=inputs,
outputs=outputs,
attrs=getattr(self, 'attrs', {}))
# infer variable type and infer shape in compile-time
op.desc.infer_var_type(block.desc)
op.desc.infer_shape(block.desc)
mean_inputs = map(block.var, output_names)
if len(mean_inputs) == 1:
loss = block.create_var(dtype=mean_inputs[0].dtype, shape=[1])
op = block.append_op(
inputs={"X": mean_inputs}, outputs={"Out": loss}, type='mean')
op.desc.infer_var_type(block.desc)
op.desc.infer_shape(block.desc)
else:
avg_sum = []
for cur_loss in mean_inputs:
cur_avg_loss = block.create_var(dtype=cur_loss.dtype, shape=[1])
op = block.append_op(
inputs={"X": [cur_loss]},
outputs={"Out": [cur_avg_loss]},
type="mean")
op.desc.infer_var_type(block.desc)
op.desc.infer_shape(block.desc)
avg_sum.append(cur_avg_loss)
loss_sum = block.create_var(dtype=avg_sum[0].dtype, shape=[1])
op_sum = block.append_op(
inputs={"X": avg_sum}, outputs={"Out": loss_sum}, type='sum')
op_sum.desc.infer_var_type(block.desc)
op_sum.desc.infer_shape(block.desc)
loss = block.create_var(dtype=loss_sum.dtype, shape=[1])
op_loss = block.append_op(
inputs={"X": loss_sum},
outputs={"Out": loss},
type='scale',
attrs={'scale': 1.0 / float(len(avg_sum))})
op_loss.desc.infer_var_type(block.desc)
op_loss.desc.infer_shape(block.desc)
param_grad_list = append_backward(
loss=loss, parameter_list=input_to_check, no_grad_set=no_grad_set)
feed_dict = {
item[0].name: OpTest._numpy_to_lod_tensor(item[1], item[2], place)
for p_name in inputs_with_np for item in inputs_with_np[p_name]
}
fetch_list = [g for p, g in param_grad_list]
executor = Executor(place)
return map(
np.array,
executor.run(prog, feed_dict, fetch_list, return_numpy=False))